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ACD12_42_4

Organism: ACD12

megabin RP 52 / 55 MC: 37 BSCG 46 / 51 MC: 26 ASCG 0 / 38
Location: comp(1266..1817)

Top 3 Functional Annotations

Value Algorithm Source
putative dTDP-4-dehydrorhamnose 3,5-epimerase similarity KEGG
DB: KEGG
  • Identity: 44.0
  • Coverage: 182.0
  • Bit_score: 180
  • Evalue 3.50e-43
seg (db=Seg db_id=seg from=24 to=42) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
DTDP-6-DEOXY-D-GLUCOSE-3,5 EPIMERASE (db=HMMPanther db_id=PTHR21047 from=15 to=171 evalue=2.3e-20 interpro_id=IPR000888 interpro_description=dTDP-4-dehydrorhamnose 3,5-epimerase related GO=Molecular Function: dTDP-4-dehydrorhamnose 3,5-epimerase activity (GO:0008830), Biological Process: lipopolysaccharide biosynthetic process (GO:0009103)) iprscan interpro
DB: HMMPanther
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.30e-20

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 552
ATGAAAAACTTGAGTTTAGACGATGTTTTAGTTCGATTGAAGCAAGAAATTTACGTTCAGGACTATTCAAAAAAGAAAGTAATCGAAGGTGTCAAGATCGTTGAGGTGAAGAAATTTATCGGTGAAGACGGTGTTTTTGAGGAATTAACAAGAATCAATGAGCGTGGAGACTTAGAAGGATTTCCGGATTTTAAAGTTAGACAAGTAAACAGGTCAAAAATTATCGGCGGCAGTATCAAAGCCTGGCATCTGCATTATAAACAGGAAGATGTTTGGTATGTCCCACCGGAAGATCATATGATCTTGGGAATGTGGGATCTAAGAAATGATTCTGATACAAGAGATATCAAAATGAAGGTGGTTTTGGGAAACGGTAGTTCTAAGTTGGTATTTGTCCCAAGAGGAGTTGCTCATGGTGTTGTTAATGTATCTAAAAAAGCCGGGACGATCATTTACTTTGTCAACGAACAGTTTAATTTCTCCGATCCTGATGAAAAAAGATTAAAATGGGATGCGGCCGGAGCTGTTTTTTGGGAAATAAAAAAAGAATAA
PROTEIN sequence
Length: 184
MKNLSLDDVLVRLKQEIYVQDYSKKKVIEGVKIVEVKKFIGEDGVFEELTRINERGDLEGFPDFKVRQVNRSKIIGGSIKAWHLHYKQEDVWYVPPEDHMILGMWDLRNDSDTRDIKMKVVLGNGSSKLVFVPRGVAHGVVNVSKKAGTIIYFVNEQFNFSDPDEKRLKWDAAGAVFWEIKKE*