ggKbase home page

ACD12_179_1

Organism: ACD12

megabin RP 52 / 55 MC: 37 BSCG 46 / 51 MC: 26 ASCG 0 / 38
Location: comp(3..470)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal protein S3, bacterial type similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 156.0
  • Bit_score: 147
  • Evalue 2.80e-33
Prokaryotic type KH domain (KH-domain type II) (db=superfamily db_id=SSF54814 from=2 to=113 evalue=4.1e-29 interpro_id=IPR009019 interpro_description=K Homology, prokaryotic type GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.10e-29
rpsC_bact: ribosomal protein S3 (db=HMMTigr db_id=TIGR01009 from=1 to=156 evalue=1.5e-25 interpro_id=IPR005704 interpro_description=Ribosomal protein S3, bacterial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.50e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 468
ATGGGACAAAAAATATCACCTCTATCAAATCGATTAATGATTACTAAGGACTGGAAGTCCCGGTGGTTTGCCAGTGGTAAAAATTATCGTGATAAATTGATTGAAGATATCAAAATGCGGGATTTTATAATCAAAAATTATAGTATGAATTATGCGATTGAGAAAGTTATTATAAAAAGATCCCAAAAAGATATTATTATTGATATTCATTCTGCACGACCAGGTTTAATAATCGGAAGACAAGGAAAAGGAATTGAAGATTTTAAAAATAATATAGAAAAGTTTTTATTAAAAAATAAATTACCAAGCCAAAAAATTAAACTTAATGTCAGCGAAGTAAAAAAACCAGAAATAAAAGCTACTTTAATCGCTCAAAATATTGGACAACAAGTTAGCAGGAGAATACCGTATCGACGAGCTATTAAAGGTGCTATTTCTAAAGCAATGGAATCGGGTGCCAGAGGAGTC
PROTEIN sequence
Length: 156
MGQKISPLSNRLMITKDWKSRWFASGKNYRDKLIEDIKMRDFIIKNYSMNYAIEKVIIKRSQKDIIIDIHSARPGLIIGRQGKGIEDFKNNIEKFLLKNKLPSQKIKLNVSEVKKPEIKATLIAQNIGQQVSRRIPYRRAIKGAISKAMESGARGV