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ACD12_244_6

Organism: ACD12

megabin RP 52 / 55 MC: 37 BSCG 46 / 51 MC: 26 ASCG 0 / 38
Location: comp(4397..4813)

Top 3 Functional Annotations

Value Algorithm Source
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 32.9
  • Coverage: 140.0
  • Bit_score: 65
  • Evalue 1.30e-08
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=1 to=134 evalue=9.5e-18 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 9.50e-18
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=1 to=77 evalue=1.4e-12 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.40e-12

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 417
ATGTATCGATACATCGAAAGAAGGCTTTTTAAAAAAGAAGAAACAGATGATTTAGTTCAAAATGTTTTTATTTCTTTTTATAAAGCGATTGAAAAATTTGATGAAAAAAGACCGATTAAGCCATATTTATTTCAAATCGTTCAAAATGAGTTGAAGATGTATTATCGATCAAGAAAACCAACAATCCAATTAAATGAGGAAATTTATCTTGAAGACGGCCGTCTACAAGATATCATCAATAATGACGATTATTTGAGCCATTTGAATCAGGGAGAAAAAAATATTTTTGAGTATATTCGAAAAGGTTATTCATATGAAGAAATTGCACAACTAATTAAAAAACCAGTAAATACTATAAAATCTATAGTTAGAAGAGGTAGATTAAAAATAAAACTTGCTTGCACAAGCAAGAAATAA
PROTEIN sequence
Length: 139
MYRYIERRLFKKEETDDLVQNVFISFYKAIEKFDEKRPIKPYLFQIVQNELKMYYRSRKPTIQLNEEIYLEDGRLQDIINNDDYLSHLNQGEKNIFEYIRKGYSYEEIAQLIKKPVNTIKSIVRRGRLKIKLACTSKK*