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ACD37_81_5

Organism: ACD37

partial RP 46 / 55 MC: 30 BSCG 40 / 51 MC: 19 ASCG 0 / 38
Location: 3512..4255

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 241.0
  • Bit_score: 181
  • Evalue 2.80e-43
PSI_RLU (db=PatternScan db_id=PS01129 from=64 to=78 evalue=0.0 interpro_id=IPR006224 interpro_description=Pseudouridine synthase, RluC/RluD, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
RIBOSOMAL PSEUDOURIDINE SYNTHASE (db=HMMPanther db_id=PTHR10436 from=6 to=240 evalue=2.2e-55) iprscan interpro
DB: HMMPanther
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.20e-55

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 744
ATGGGAAATAATAAGCTTAAAGTTGTATTTGAGAACGATGATCTTTTTGTAATTGATAAAGATGCTGGAATTACTGTAAATAAGTCTGATACCTCGACTAAACAATTAACGCTTCAGGATCTTATTGATCAAGAAGATATGATTGACAAAAACGATAACGATGAAGAGTTCCTTAAAAGATCGGGGATAGTCCATAGGCTAGATAAGGAGACATCGGGGCTTATTATAGTTGCTAAAAATTCGATAGCATTCAGAGCCCTCCAAGAGCAGTTTAAAGAAAGAAAAGTAGAAAAGAGCTATCTTGCGTTAGCTCATGGGGAGGTTGTTCCAATGGAGGGAGAAATTTCAGCTCCTATTGGAAGGCTTCCTTGGAACAGAAAAAGGTTTGGGGTTCTTGCAGGGGGCAGGGAATCATTAACCCCATATAGGGTTATAGCTCTTTATAAAAGTGTTCCGTCAGAAGAGATTTTGAGTTTTATCAGCTTATTCCCTAAAACCGGAAGAACTCATCAAATCAGAGTTCATTTGAAATTCATAAACCACCCGATATTCGGAGACCCGCTTTATGGAGGCAGAAAAACAGTAAGGGAAGACAGAAAGCTTTTATCAAGAGTATTTTTACATGCAGAAAAATTATCTTTTTTTGATCCTAAGACCGAAGAGAGGATTGTCCTTAATTCAGTACTTCCGACAGAGCTTAAAGACTTGCTTGAAAATTTTGAACTAAAAACTGATAATAATTAA
PROTEIN sequence
Length: 248
MGNNKLKVVFENDDLFVIDKDAGITVNKSDTSTKQLTLQDLIDQEDMIDKNDNDEEFLKRSGIVHRLDKETSGLIIVAKNSIAFRALQEQFKERKVEKSYLALAHGEVVPMEGEISAPIGRLPWNRKRFGVLAGGRESLTPYRVIALYKSVPSEEILSFISLFPKTGRTHQIRVHLKFINHPIFGDPLYGGRKTVREDRKLLSRVFLHAEKLSFFDPKTEERIVLNSVLPTELKDLLENFELKTDNN*