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ACD37_162_2 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
GreA/GreB family elongation factor similarity KEGG
DB: KEGG
57.3 157.0 170 4.10e-40 tjr:TherJR_0229
seg (db=Seg db_id=seg from=12 to=29) iprscan interpro
DB: Seg
null null null null tjr:TherJR_0229
seg (db=Seg db_id=seg from=131 to=142) iprscan interpro
DB: Seg
null null null null tjr:TherJR_0229
coiled-coil (db=Coil db_id=coil from=12 to=33 evalue=NA) iprscan interpro
DB: Coil
null null null null tjr:TherJR_0229
GREAB_2 (db=PatternScan db_id=PS00830 from=120 to=136 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: PatternScan
null null null 0.0 tjr:TherJR_0229
greA: transcription elongation factor GreA (db=HMMTigr db_id=TIGR01462 from=6 to=155 evalue=3.0e-66 interpro_id=IPR006359 interpro_description=Transcription elongation factor GreA GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMTigr
null null null 3.00e-66 tjr:TherJR_0229
GreA_GreB_N (db=HMMPfam db_id=PF03449 from=1 to=75 evalue=1.6e-24 interpro_id=IPR022691 interpro_description=Transcription elongation factor, GreA/GreB, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 1.60e-24 tjr:TherJR_0229
GreA_GreB (db=HMMPfam db_id=PF01272 from=84 to=155 evalue=8.4e-24 interpro_id=IPR001437 interpro_description=Transcription elongation factor, GreA/GreB, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 8.40e-24 tjr:TherJR_0229
GreA transcript cleavage protein, N-terminal domain (db=superfamily db_id=SSF46557 from=3 to=80 evalue=2.0e-23 interpro_id=IPR022691 interpro_description=Transcription elongation factor, GreA/GreB, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: superfamily
null null null 2.00e-23 tjr:TherJR_0229
no description (db=Gene3D db_id=G3DSA:1.10.287.180 from=2 to=76 evalue=2.2e-21 interpro_id=IPR022691 interpro_description=Transcription elongation factor, GreA/GreB, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: Gene3D
null null null 2.20e-21 tjr:TherJR_0229
FKBP-like (db=superfamily db_id=SSF54534 from=81 to=154 evalue=4.6e-19) iprscan interpro
DB: superfamily
null null null 4.60e-19 tjr:TherJR_0229
no description (db=Gene3D db_id=G3DSA:3.10.50.30 from=77 to=154 evalue=1.4e-16 interpro_id=IPR001437 interpro_description=Transcription elongation factor, GreA/GreB, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: Gene3D
null null null 1.40e-16 tjr:TherJR_0229
GreA_GreB (db=HAMAP db_id=MF_00105 from=2 to=155 evalue=22.182) iprscan interpro
DB: HAMAP
null null null 2.22e+01 tjr:TherJR_0229
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=77133 species="Bacteria; UNIPROT
DB: UniProtKB
100.0 155.0 304 1.20e-79 K2CJT8_9BACT
GreA/GreB family elongation factor; K03624 transcription elongation factor GreA alias=ACD37_C00162G00002,ACD37_500188.4918.6G0002,ACD37_500188.4918.6_2 id=42002 tax=ACD37 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=OP11 similarity UNIREF
DB: UNIREF90
100.0 null 303 3.40e-80 tjr:TherJR_0229