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64_010_scaffold_850_2

Organism: 64_010_Varibaculum_cambriense_54_8

near complete RP 46 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: 133..624

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 163.0
  • Bit_score: 335
  • Evalue 3.80e-89
def2; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 164.0
  • Bit_score: 269
  • Evalue 9.90e-70
peptide deformylase n=1 Tax=Varibaculum cambriense RepID=UPI0003B6E768 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 163.0
  • Bit_score: 339
  • Evalue 1.90e-90

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Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGGCGTTTCGAGAAATCAGAGTAATCGGGGATCCCATTTTACGCACCCCCTGTGAACCGGTGGGCGAAATCGATGAGCATATCAAACAGTTGGTAGAAGACCTGCTGGAAACGGTAGATGCCGATGGGCGCGCCGGTCTAGCCGCCAACCAGATTGGGGTAGGGCTGCGGGCTTTTTCCTGGAACATCGACGGGGAAGTTGACTATATTCTTAACCCGCGTCTGGTAGAGGTTTCTGAGGACGAATACCAAGATGGCGATGAAGGCTGTCTTTCGGTGCCGGGACTGTTCTTTCCCTGCCAGCGTGCCTGGTACGCGCGTGCCGAAGGTATCGACTTGGATGGCAAGCCGAAAGTGGTTGAGGGTGAAGAGCTGATGGGACGTTGCATCCAGCATGAATGCGACCACTTGGATGGGCATCTGTACTTAGATCGTCTGGATCGGTTAACTCGCCGCAAGGCCTTTAAAGAGATTCGCGAAAAAGGTCTGTAG
PROTEIN sequence
Length: 164
MAFREIRVIGDPILRTPCEPVGEIDEHIKQLVEDLLETVDADGRAGLAANQIGVGLRAFSWNIDGEVDYILNPRLVEVSEDEYQDGDEGCLSVPGLFFPCQRAWYARAEGIDLDGKPKVVEGEELMGRCIQHECDHLDGHLYLDRLDRLTRRKAFKEIREKGL*