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64_010_scaffold_742_8

Organism: 64_010_Varibaculum_cambriense_54_8

near complete RP 46 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: 8526..8681

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 52.0
  • Bit_score: 104
  • Evalue 4.60e-20
rpoB; DNA-directed RNA polymerase subunit beta RPOB; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 42.0
  • Bit_score: 62
  • Evalue 4.40e-08
DNA-directed RNA polymerase subunit beta n=2 Tax=Varibaculum cambriense RepID=UPI0003B57583 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 52.0
  • Bit_score: 107
  • Evalue 3.80e-21

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Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 156
TTGGCTGCTGAAACCGCATCTGCCAATAAGCCTTCTCGCCTGTCGTTTGCAAAACTACAGGAAGTTATGGCCCCTCCGAATCTGCTGGACATTCAAAGGAAATCTTTTGAATGGCTCTTAGGCACCCCTCAGTGGCGCGAGAGCGCAGAAGAAAAA
PROTEIN sequence
Length: 52
LAAETASANKPSRLSFAKLQEVMAPPNLLDIQRKSFEWLLGTPQWRESAEEK