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ACD38_6_4

Organism: ACD38

near complete RP 48 / 55 MC: 11 BSCG 45 / 51 MC: 4 ASCG 0 / 38
Location: comp(3116..3460)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 114.0
  • Bit_score: 125
  • Evalue 1.10e-26
rplT_bact: ribosomal protein L20 (db=HMMTigr db_id=TIGR01032 from=1 to=114 evalue=3.0e-52 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.00e-52
Ribosomal_L20 (db=HMMPfam db_id=PF00453 from=2 to=109 evalue=1.0e-37 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.00e-37

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Taxonomy

R_OP11_Curtissbacteria_40_16 → Curtissbacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 345
ATGGCAAGAGTTAAAAGGGGAGTCGTCTCTCACAGAAAACATAAAAAGGTTTTAAAGCTTACCAAAGGCCACATCGGCGGCCGGAGCAAGCTGATAAGACAGGCAAAATCATCCCTCCTTCATGCAGGAGAATATGCATTTGCAGGCAGAAAACTCCGAAAACGCGATATGCGAAGACTTTGGATCACCCAAATGGGAATTGCCCTAAAAAATGAAGGTTTATCTTATTCCAAATTTATGGCTCAACTTAAAACCAAAAATATAAATTTAGACCGCAAAGTTTTATCTGACTTGGCAGTAAATCACATTGAAGACTTCAAAAAAATTATCTCCGAAGTAAAGTAA
PROTEIN sequence
Length: 115
MARVKRGVVSHRKHKKVLKLTKGHIGGRSKLIRQAKSSLLHAGEYAFAGRKLRKRDMRRLWITQMGIALKNEGLSYSKFMAQLKTKNINLDRKVLSDLAVNHIEDFKKIISEVK*