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ACD38_9_10 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8) rbh KEGG
DB: KEGG
45.4 775.0 644 4.80e-182 sti:Sthe_1553
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8) similarity KEGG
DB: KEGG
45.4 775.0 644 4.80e-182 sti:Sthe_1553
Polyribonucleotide nucleotidyltransferase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=PNP_THERP (db=UNIREF evalue=4.0e-164 bit_score=582.0 identity=46.43 coverage=88.2276843467012) similarity UNIREF
DB: UNIREF
46.43 88.23 582 4.00e-164 sti:Sthe_1553
seg (db=Seg db_id=seg from=237 to=248) iprscan interpro
DB: Seg
null null null null sti:Sthe_1553
seg (db=Seg db_id=seg from=698 to=717) iprscan interpro
DB: Seg
null null null null sti:Sthe_1553
seg (db=Seg db_id=seg from=566 to=581) iprscan interpro
DB: Seg
null null null null sti:Sthe_1553
seg (db=Seg db_id=seg from=131 to=144) iprscan interpro
DB: Seg
null null null null sti:Sthe_1553
seg (db=Seg db_id=seg from=719 to=772) iprscan interpro
DB: Seg
null null null null sti:Sthe_1553
polynuc_phos: polyribonucleotide nucleot (db=HMMTigr db_id=TIGR03591 from=10 to=691 evalue=0.0 interpro_id=IPR012162 interpro_description=Polyribonucleotide nucleotidyltransferase GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654), Cellular Component: mitochondrion (GO:0005739), Biological Process: mRNA catabolic process (GO:0006402)) iprscan interpro
DB: HMMTigr
null null null 0.0 sti:Sthe_1553
Polyribonucleotide nucleotidyltransferase (db=HMMPIR db_id=PIRSF005499 from=1 to=713 evalue=1.6e-278 interpro_id=IPR012162 interpro_description=Polyribonucleotide nucleotidyltransferase GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654), Cellular Component: mitochondrion (GO:0005739), Biological Process: mRNA catabolic process (GO:0006402)) iprscan interpro
DB: HMMPIR
null null null 1.60e-278 sti:Sthe_1553
POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE (db=HMMPanther db_id=PTHR11252 from=146 to=718 evalue=5.3e-184 interpro_id=IPR012162 interpro_description=Polyribonucleotide nucleotidyltransferase GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654), Cellular Component: mitochondrion (GO:0005739), Biological Process: mRNA catabolic process (GO:0006402)) iprscan interpro
DB: HMMPanther
null null null 5.30e-184 sti:Sthe_1553
Ribosomal protein S5 domain 2-like (db=superfamily db_id=SSF54211 from=314 to=466 evalue=5.6e-42 interpro_id=IPR020568 interpro_description=Ribosomal protein S5 domain 2-type fold) iprscan interpro
DB: superfamily
null null null 5.60e-42 sti:Sthe_1553
Ribosomal protein S5 domain 2-like (db=superfamily db_id=SSF54211 from=1 to=145 evalue=8.2e-40 interpro_id=IPR020568 interpro_description=Ribosomal protein S5 domain 2-type fold) iprscan interpro
DB: superfamily
null null null 8.20e-40 sti:Sthe_1553
Ribonuclease PH domain 2-like (db=superfamily db_id=SSF55666 from=139 to=233 evalue=2.2e-23 interpro_id=IPR015847 interpro_description=Exoribonuclease, phosphorolytic domain 2 GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) iprscan interpro
DB: superfamily
null null null 2.20e-23 sti:Sthe_1553
no description (db=HMMSmart db_id=SM00316 from=621 to=691 evalue=2.7e-23) iprscan interpro
DB: HMMSmart
null null null 2.70e-23 sti:Sthe_1553
Ribonuclease PH domain 2-like (db=superfamily db_id=SSF55666 from=455 to=561 evalue=3.7e-23 interpro_id=IPR015847 interpro_description=Exoribonuclease, phosphorolytic domain 2 GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) iprscan interpro
DB: superfamily
null null null 3.70e-23 sti:Sthe_1553
Eukaryotic type KH-domain (KH-domain type I) (db=superfamily db_id=SSF54791 from=541 to=637 evalue=5.7e-22) iprscan interpro
DB: superfamily
null null null 5.70e-22 sti:Sthe_1553
RNase_PH (db=HMMPfam db_id=PF01138 from=323 to=458 evalue=8.5e-21 interpro_id=IPR001247 interpro_description=Exoribonuclease, phosphorolytic domain 1 GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) iprscan interpro
DB: HMMPfam
null null null 8.50e-21 sti:Sthe_1553
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=620 to=690 evalue=2.4e-19 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) iprscan interpro
DB: superfamily
null null null 2.40e-19 sti:Sthe_1553
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=618 to=691 evalue=5.2e-18 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) iprscan interpro
DB: Gene3D
null null null 5.20e-18 sti:Sthe_1553
RNase_PH (db=HMMPfam db_id=PF01138 from=13 to=145 evalue=9.0e-17 interpro_id=IPR001247 interpro_description=Exoribonuclease, phosphorolytic domain 1 GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) iprscan interpro
DB: HMMPfam
null null null 9.00e-17 sti:Sthe_1553
S1 (db=HMMPfam db_id=PF00575 from=620 to=689 evalue=1.4e-16 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMPfam
null null null 1.40e-16 sti:Sthe_1553
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 (db=superfamily db_id=SSF46915 from=227 to=326 evalue=4.4e-15 interpro_id=IPR015848 interpro_description=Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) iprscan interpro
DB: superfamily
null null null 4.40e-15 sti:Sthe_1553
KH_1 (db=HMMPfam db_id=PF00013 from=559 to=612 evalue=4.6e-13 interpro_id=IPR018111 interpro_description=K Homology, type 1, subgroup GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMPfam
null null null 4.60e-13 sti:Sthe_1553
no description (db=HMMSmart db_id=SM00322 from=553 to=618 evalue=7.7e-13 interpro_id=IPR004087 interpro_description=K Homology GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMSmart
null null null 7.70e-13 sti:Sthe_1553
RNase_PH_C (db=HMMPfam db_id=PF03725 from=148 to=211 evalue=1.3e-10 interpro_id=IPR015847 interpro_description=Exoribonuclease, phosphorolytic domain 2 GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) iprscan interpro
DB: HMMPfam
null null null 1.30e-10 sti:Sthe_1553
PNPase (db=HMMPfam db_id=PF03726 from=245 to=319 evalue=6.9e-08 interpro_id=IPR015848 interpro_description=Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) iprscan interpro
DB: HMMPfam
null null null 6.90e-08 sti:Sthe_1553
RNase_PH_C (db=HMMPfam db_id=PF03725 from=462 to=531 evalue=2.2e-06 interpro_id=IPR015847 interpro_description=Exoribonuclease, phosphorolytic domain 2 GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) iprscan interpro
DB: HMMPfam
null null null 2.20e-06 sti:Sthe_1553
no description (db=Gene3D db_id=G3DSA:1.10.10.400 from=240 to=319 evalue=0.00027 interpro_id=IPR015848 interpro_description=Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) iprscan interpro
DB: Gene3D
null null null 2.70e-04 sti:Sthe_1553
no description (db=Gene3D db_id=G3DSA:3.30.1370.10 from=551 to=618 evalue=0.00047) iprscan interpro
DB: Gene3D
null null null 4.70e-04 sti:Sthe_1553
KH_TYPE_1 (db=ProfileScan db_id=PS50084 from=554 to=613 evalue=13.816 interpro_id=IPR004088 interpro_description=K Homology, type 1 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: ProfileScan
null null null 1.38e+01 sti:Sthe_1553
S1 (db=ProfileScan db_id=PS50126 from=623 to=691 evalue=18.806 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: ProfileScan
null null null 1.88e+01 sti:Sthe_1553
PNPase (db=HAMAP db_id=MF_01595 from=3 to=694 evalue=25.563 interpro_id=IPR012162 interpro_description=Polyribonucleotide nucleotidyltransferase GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654), Cellular Component: mitochondrion (GO:0005739), Biological Process: mRNA catabolic process (GO:0006402)) iprscan interpro
DB: HAMAP
null null null 2.56e+01 sti:Sthe_1553
tro:trd_0623 polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] alias=ACD38_C00009G00010,ACD38_61442.47416.10G0010,ACD38_61442.47416.10_10 id=43198 tax=ACD38 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi organism_group=OP11 organism_desc=OP11 similarity UNIREF
DB: UNIREF90
100.0 null 1505 0.0 sti:Sthe_1553
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_40_16_curated UNIPROT
DB: UniProtKB
100.0 772.0 1505 0.0 ggdbv1_87869224