Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
RNA binding S1 domain-containing protein | similarity |
KEGG
DB: KEGG |
30.8 | 364.0 | 180 | 1.20e-42 | ttr:Tter_1350 |
seg (db=Seg db_id=seg from=54 to=65) | iprscan |
interpro
DB: Seg |
null | null | null | null | ttr:Tter_1350 |
seg (db=Seg db_id=seg from=93 to=110) | iprscan |
interpro
DB: Seg |
null | null | null | null | ttr:Tter_1350 |
coiled-coil (db=Coil db_id=coil from=264 to=285 evalue=NA) | iprscan |
interpro
DB: Coil |
null | null | null | null | ttr:Tter_1350 |
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=208 to=292 evalue=3.3e-21 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 3.30e-21 | ttr:Tter_1350 |
no description (db=HMMSmart db_id=SM00316 from=209 to=279 evalue=2.5e-17) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 2.50e-17 | ttr:Tter_1350 |
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=274 to=356 evalue=5.1e-15 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 5.10e-15 | ttr:Tter_1350 |
S1 (db=HMMPfam db_id=PF00575 from=208 to=279 evalue=1.4e-13 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.40e-13 | ttr:Tter_1350 |
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=206 to=281 evalue=1.9e-13 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.90e-13 | ttr:Tter_1350 |
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=89 evalue=5.2e-12 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 5.20e-12 | ttr:Tter_1350 |
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=121 to=207 evalue=3.4e-11 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 3.40e-11 | ttr:Tter_1350 |
S1 (db=HMMPfam db_id=PF00575 from=294 to=356 evalue=1.0e-10 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.00e-10 | ttr:Tter_1350 |
TEX PROTEIN-RELATEDTRANSCRIPTION ACCESSORY PROTEIN (S1 RNA BINDING DOMAIN) (db=HMMPanther db_id=PTHR10724 from=205 to=331 evalue=8.0e-09) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 8.00e-09 | ttr:Tter_1350 |
S1 (db=HMMPfam db_id=PF00575 from=126 to=192 evalue=9.0e-08 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 9.00e-08 | ttr:Tter_1350 |
no description (db=HMMSmart db_id=SM00316 from=294 to=359 evalue=1.5e-07) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 1.50e-07 | ttr:Tter_1350 |
no description (db=HMMSmart db_id=SM00316 from=16 to=83 evalue=2.8e-06) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 2.80e-06 | ttr:Tter_1350 |
S1 (db=HMMPfam db_id=PF00575 from=17 to=81 evalue=3.9e-06 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 3.90e-06 | ttr:Tter_1350 |
no description (db=HMMSmart db_id=SM00316 from=122 to=194 evalue=5.1e-05) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 5.10e-05 | ttr:Tter_1350 |
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=15 to=85 evalue=0.00017 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.70e-04 | ttr:Tter_1350 |
S1 (db=ProfileScan db_id=PS50126 from=124 to=194 evalue=13.497 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.35e+01 | ttr:Tter_1350 |
S1 (db=ProfileScan db_id=PS50126 from=18 to=83 evalue=13.879 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.39e+01 | ttr:Tter_1350 |
S1 (db=ProfileScan db_id=PS50126 from=296 to=359 evalue=14.824 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.48e+01 | ttr:Tter_1350 |
S1 (db=ProfileScan db_id=PS50126 from=211 to=279 evalue=16.421 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.64e+01 | ttr:Tter_1350 |
RNA binding S1 domain protein {ECO:0000313|EMBL:KKR15571.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;" |
UNIPROT
DB: UniProtKB |
100.0 | 369.0 | 710 | 1.30e-201 | A0A0G0NRZ2_9BACT | |
RNA binding S1 domain protein; K02945 small subunit ribosomal protein S1 alias=ACD38_C00045G00002,ACD38_93697.6472.10G0002,ACD38_93697.6472.10_2 id=43769 tax=ACD38 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi organism_group=OP11 organism_desc=OP11 | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 709 | 3.80e-202 | ttr:Tter_1350 |