ggKbase home page

gwc1_scaffold_2285_6

Organism: GWC1_OD1_44_10

near complete RP 38 / 55 BSCG 44 / 51 MC: 1 ASCG 10 / 38
Location: 4922..6145

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKU29561.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 407.0
  • Bit_score: 790
  • Evalue 1.10e-225
RNA polymerase sigma factor RpoD KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 372.0
  • Bit_score: 396
  • Evalue 7.00e-108
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 396
  • Evalue 8.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1224
ATGACAAAAAAGCAAAAAATCAAAAAAAAGAAGCTGTCTAAAAAAGCCGCGATCAAATCAAAAAAGCCGGCGCGGAGTGCCGTGCCCCTGAAGCCCACAAAAGCGGAACTCAAAAAAGAATTCAGCGAAGAAAAAGTTGATGCGCTTTTAAAAAAAGGCAAAGAGCGCGGTTTCCTGACCTACCCGGAGATTTTGGCAGCTTTTCCTCATATTGAATACAGCGTAATTTTTTTGGAGGATCTTTACTCGCGCATGGATGCTGCCGGAGTTGATATTTTGGAAGGAAAAGAACTTTTGGAAATCGCGCCGCCGCCTTTGGCCGGCGAACCTGTAGGTAAAGGAAAGGCAAAGAGAAAATCGCGAGAGCGCGCGCTGGCTTTGGATCAGGAAATCACGGCGGCGGATTCGGTACAAATGTATCTGAAAGAAATAGGCAGAATTCAGCTTATTTCCGGCGAAGAAGAAAAAGAGCTCGCCAGAAAGATTGAAGCGGGAGACGAGGATGCCAAAAACCGCTTGGCGCAAGCCAACTTGCGTTTGGTAGTTTCCATTGCGAAAAAATACGTCGGGCGGACGCCGAACCTGACAATGCTTGACTTGATTCAAGAGGGCAATTTGGGGCTATTCCGCGCAGTGGAAAAATTTGATTGGCGGAAGGGCTATAAATTTTCCACTTATGCCACTTGGTGGATCAGGCAGGCAGTCACGCGAGCAATCGCTGATCAGGGAAAAACAATCCGCATTCCGGTGCACATGGTGGAAACAATTTCAAAATACCAGCAGGTCAGGCGGCGCCTTACGCAGGATTTGGGAAGAGACCCGTTGGCAGAGGAGTTGGCTGCGGAGATGAACGTTGATGTGGAAAAGATACATCATATCCAGAAAATTTCGCAGGACACCGTGTCTTTGGAGGCGCCTGTTGGGGAAGACGACGAAGATTCGGTTTTGGGCGATTTTATTGAAGACGAAAAAATGCTTACTCCGGCACAGGAAGCCGCCAGAAAACTTTTAAAAGACCACATCAAAGAAATTTTGGTTGATCTGATGCCAAGGGAGCAGAAAATACTCCGTATGCGTTTTGGTTTGGATGACGGCATTACGCATACTTTGGAGGAAGTTGGTGCGGAGTTCGGCGTTACTCGCGAGCGCATCCGGCAGATTGAAGCCAAGGCTTTGGAAAAAATCCGCCAGCACCACAAAGTCATAAAATTGTATGAGTATTAA
PROTEIN sequence
Length: 408
MTKKQKIKKKKLSKKAAIKSKKPARSAVPLKPTKAELKKEFSEEKVDALLKKGKERGFLTYPEILAAFPHIEYSVIFLEDLYSRMDAAGVDILEGKELLEIAPPPLAGEPVGKGKAKRKSRERALALDQEITAADSVQMYLKEIGRIQLISGEEEKELARKIEAGDEDAKNRLAQANLRLVVSIAKKYVGRTPNLTMLDLIQEGNLGLFRAVEKFDWRKGYKFSTYATWWIRQAVTRAIADQGKTIRIPVHMVETISKYQQVRRRLTQDLGRDPLAEELAAEMNVDVEKIHHIQKISQDTVSLEAPVGEDDEDSVLGDFIEDEKMLTPAQEAARKLLKDHIKEILVDLMPREQKILRMRFGLDDGITHTLEEVGAEFGVTRERIRQIEAKALEKIRQHHKVIKLYEY*