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gwc1_scaffold_2102_4

Organism: GWC1_OD1_39_8_partial

partial RP 36 / 55 BSCG 39 / 51 ASCG 8 / 38 MC: 1
Location: 2304..3986

Top 3 Functional Annotations

Value Algorithm Source
Tfp pilus assembly protein PilB; K02652 type IV pilus assembly protein PilB Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 560.0
  • Bit_score: 1080
  • Evalue 0.0
xpsE; Type II secretory pathway ATPase PulE/Tfp KEGG
DB: KEGG
  • Identity: 38.9
  • Coverage: 552.0
  • Bit_score: 364
  • Evalue 4.10e-98
Putative type II secretion system protein E similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 502
  • Evalue 1.00e+00

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Taxonomy

RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated → RIF-OD1-1 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1683
ATGATTAAATTCGACGAAGATAAGCAGAAGGATCGAATAGACACACTACATAAAAAAGAGGAGGAGGAGCTCGTATCTACTCTATCCTCACACCACGGTGTCCCTTACCTTGATCTTTCCACACATCCTATAAACATTGATGCTTTAAGGATTATCAAAGAAGCTGAGGCTAGAGAAGCCGATTTGGCAGTCTTCAATGTTACGGATAAAAAGATCGAAGTGGCCGTTCTCTCTCCTGACAAGGAGAAGACTGCGCAAGCCATCGAAGATTTAAAACATCGCGGTTATATACCAGAAATATTCATGGTCTCACATCAGAGTTTAAATAAGGTTTGGGAAAGATATAAAGATCTTTCATATTCATTCCAAACCAAGTCTGGTGCTCTCGATATATCAAACGAAGAGATCATGGAGGTGACAAAGAAAGTTACTTCGCTTAGTGATGTTAAGAAAATGATCGAGGGAGTGCTTTCTTTGAAACGCGCTTATCGCATTTCAAAAATTTTAGAAATTATTTTAGCCGGAGCTATCGCTCTCAAAGCTTCTGACATCCATCTCGAACCAGAGGATAAGGATTTGCGTTTGCGTTACAGACTAGACGGCGTGCTTACTGATATATTACATTTTGATTCTGAAACTTTTGAATTACTGCTTTCTCGCATAAAACTTGTCAGTGAACTCAAACTCAACATCAGAGAGAAAGCTCAAGACGGACGTTTTTCTATAAAACTTACTGACTCTGAGATAGAAGTGCGCACCTCGCTTCTGCCCGGACCTTATGGTGAGTCAGTGGTCATGCGTGTTCTTAGTCCAGATACCATAGCTGTGGCGTTAGAAAATCTCGGCATTCATCCGCGCTTATTAAAAATACTTGAAGGAGAAATTAGAAAACCAAATGGTCTCATTCTCACCACCGGTCCAACTGGTTCAGGTAAAACTACAACTCTCTATGCTTTCTTGAAAAAAATATATACGCCAGATATTAAGGTAGTGACTATTGAAAATCCCATTGAATATCATCTTGAGGGTATTGTCCAAACACAAGCAGAAGCTGAAAAAGGTTATACCTTTGCCGAAGGTCTGCGCAGTGCTTTGCGCCAAGATCCAGATGTAATCATGGTTGGAGAAATTCGTGACAATGAAACTGCTTCGGTGGCAGTCAACGCGGCACTGACCGGACACTTGGTGCTTTCTACTTTGCACACCAACAACGCCGCTGGCTCATTTCCGCGACTCCTTGACCTTGGTGTTAATCCTAAAGTGATAAGTTCTGCTATCAATATCTCCATAGCTCAAAGATTGGTACGCAAACTGTGCCAGACTTGCAAGAAAGAAGTAGCACTCGATGGTGCGCATAAAGAGTTAATAGAGAAAGTTGTGAAAGGAATCGTGGATCCAGTTTATATGGAAGGTATTCAGACAAAAAATTCTTGGACTTCTGTAGGTTGTCCTGAATGTAATAATTTAGGATTTAAAGGACGTATCGGTATCTTCGAAGCTATTTTAGTAGATAACAATATAGAAAAAGTTGTTATCAATAATCCTTCCGAACGCGACATTCGTGAAGCCGCCAGAGTGCAGAAACTTCTTACTCTGGTAGAAGATGGGATCATAAAAGTACTCTCCGGTATCACTACTATAGAAGAACTCGACCGAGTTGTTGACTTGTCAAATGTGTTGTAG
PROTEIN sequence
Length: 561
MIKFDEDKQKDRIDTLHKKEEEELVSTLSSHHGVPYLDLSTHPINIDALRIIKEAEAREADLAVFNVTDKKIEVAVLSPDKEKTAQAIEDLKHRGYIPEIFMVSHQSLNKVWERYKDLSYSFQTKSGALDISNEEIMEVTKKVTSLSDVKKMIEGVLSLKRAYRISKILEIILAGAIALKASDIHLEPEDKDLRLRYRLDGVLTDILHFDSETFELLLSRIKLVSELKLNIREKAQDGRFSIKLTDSEIEVRTSLLPGPYGESVVMRVLSPDTIAVALENLGIHPRLLKILEGEIRKPNGLILTTGPTGSGKTTTLYAFLKKIYTPDIKVVTIENPIEYHLEGIVQTQAEAEKGYTFAEGLRSALRQDPDVIMVGEIRDNETASVAVNAALTGHLVLSTLHTNNAAGSFPRLLDLGVNPKVISSAINISIAQRLVRKLCQTCKKEVALDGAHKELIEKVVKGIVDPVYMEGIQTKNSWTSVGCPECNNLGFKGRIGIFEAILVDNNIEKVVINNPSERDIREAARVQKLLTLVEDGIIKVLSGITTIEELDRVVDLSNVL*