ggKbase home page

gwc1_scaffold_4944_3

Organism: GWC1_OD1_39_8_partial

partial RP 36 / 55 BSCG 39 / 51 ASCG 8 / 38 MC: 1
Location: comp(4939..8178)

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 999.99
  • Bit_score: 1089
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:KKR30328.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2124
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 1088
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria bacterium GW2011_GWC1_39_8 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 3240
ATGCATACACCTTCATCGTCGCCAAAATCTCTCAATAACATACCACAACCGAACTCTTCAAACCCACTCAGGGTAAAGAAATACTTCGGTCGTTTCAGGAAACCTCTAGCCGAGATTCCTAACCTTGTGGTCTCACAGGTAGAATCTTTCAAATGGCTTATTGAAAAAGGTCTTAAGGAAATTTTCGAAGAATTCTCATCTATCAAAGATTTTTCAGAAAAGAAGTTTCAACTAGATTTTATCGGTTTTGAATTAGCGGAGCCAAAGTTTGACGAATATGTAGCCAAGGATAAAAAACTCTCTTATGAGGCGCCTTTGAAAGTTCGGGTACGACTCAAGAACTTGATCATGAATACAGAGAAAGAGCAGGAGATATTTATGGCTGATTTCCCGCTGATGACTTCTCATGGAACTTTTATAATCTCTGGTATTGAACGTGTGGTAGTACCCCAGCTTGCTCGATCTACTGGAGTCTCTTTCACTGCCCAAGAATTGAAGGGTAAAAAGACTTTTGGCGCCAAAATTATCCCTAGTCGTGGATCTTGGATCGAGATCGAAACTGATCTAGACGGGACAATCTACGTAAGAATCGATCGCAAGAGGAAGTTTCCCGTAACAACTCTTCTACGCGCATATGGCGTAACTTCAAACGAGAAGATTCTATCTCTTTTTGAAAAAACTCCAGAAGCTAAACATTATATAGAAAAAACTTTAGCCAAAGACCATACCACTACCATAGATGAAGCATGCATAGAGATTCATAAGCGTTTACGTGATGGTGATTTGGCTGCCGCTGACAATGCTCGCGAGTTTGTGCATTCAATATTTGATAAAGAACGTTATGACCTGTCTCGTGTAGGACGCTTCAGATTTAATAACCGTTTTGGAATTAAAGAAACTGCAAAAGAGATTGAAAACCGCACTCTCTCGCTTTCTGATCTTGTTTTAATTATTTCTCATATCATCCATCTCAACATTACTCCCGGTTCCCTAGAAGATGATATTGACCATCTTAGTTCTCGTAGAGTGCGTTTTGTCGGCGAACTTTTCCAACACAAGATTCGTGTGGGTATGGCTCAGATCAAAAGAAATATACAAAACAGGATGTCCACCATTGATACTGACGTAACCTTGCCAGTGCAATTTATCTCTCCTAAACCGCTTCAAGCTAGAATGAAAGAATTCTTCACTACTAACCAGTTGTCACAGTTCATGCAACAGACTAATGCTTTAGAGGAACTTGAACATCTTCGTACAGTATCTGCTCTCGGACCCGGCGGTCTCAATCGTGCTCGTGCTGGTTATGAAGTACGTGACGTACACCCTTCACACTATGGACGCCTTTGTCCTATTCAGACTCCGGAAGGTCCGAATATCGGTCTTATCTTACGCTTAGCCACATATGCTCGGGTTAACGAATTTGGCATGATCGAGACTCCTTATGCAGTCGTTAAAAATGGCAAGATTACTGGTGAGATTAAATATCTAAATGCTTTAGAGGAAGAAAATTTTAGCATTGCTCATGCGGCTACTCCTGTGGTGGATGACAAAATAGTTCCTGAAATTGTAGAAGTCCGTATCAAAGGTACCCCGCAAACACTTTCTCGCGACGAAGTTCATTTCATGGATGTGGCTACCAACCAAGCTTTCTCTATAGCAACTTCCATGATTCCGTTTCTTAACCATGATGATGCTAACCGTGCACTTATGGGTTCAAATATGCAGAAACAGGCTACACCGTGCATTGTTCCAGAAGTGCCATTAGTAGCCACAGGTATTGAGGAGGTAGCCATTCGCGATACCGGACGCGTTATCTTCTCTGATGTCGAAGGAGTAGTGTCTTATGTCGATGGCAAAATGGTAATGGTTAAAGACAATAAGAACAATATCCACAAGTTTCCGCTAGTGAATTTTTCTATGACTAATGGATTTACCATTTTTCACCAGAGACCTTCAGTAGAATTGGGGCAGAAAGTGAAAAAAGGTACCGTCTTGGCCGATACATCTTCTTCATCTGATGGACAAATGTCTGTTGGGCAGAATGTGCTTGTGGCTTTCATGTCTTGGTCTGGAGCTAATTACGAAGACGCTATTATCATATCTGAACGTCTGGTTGAGAAAAGTAAATTTACCTCAATCCATATAGAAGAATTTACTATCAACGTGCGCGATACTAAACTTGGACCAGAAATGACTACTTGTGATATTCCAAATGTTGGAGAGTCTAAACTCAAGAATTTGGCAGAAGATGGCATTATTAGAGTCGGCGCTGAAGTACGTTCAGGTGATATCTTAGTAGGTAAGATTACTCCTAAAGGAGAATCTCAACTGACTCCAGAAGAGCGTTTGCTTCGATCTTTATTTGGTGAGAAGGCTCGTGATGTCAAAGATACTTCCAAGCGGATGGAGGGCGGTAAACGAGGTCGTGTGGTATCAGTACAAATATTTTCTCGTGAAAAAGGAGACAAACTTGATTCCGGTGTTTTAAAACAAATCAATATTCAGGTGGCACAACTGCGTAATGTAAGTGTCGGTGATAAACTTGCTGGGCGACATGGTAATAAGGGTGTCATCTCCAAGATTTTACCAGTGGAAGATATGCCTTATATGGCCGACGGTACTCCTATAGATGTTATCCTGACACCTCTTGGAGTTCCTTCACGCATGAATCTTGGCCAGATATTAGAAATGCATCTCGGTCTTGCCGCTCATACTCTAAACTATCAAGCTATCGTGCCACCATTTGCCGGCGCTACTGAAGATGAGATTAAAGAAGAGCTTGTAAAGGCCCAGTTTAAAGAGTCAGGCAAGGTTAAGCTTTTTGACGGTCGTACTGGCAATGCTTTTGATCACGAAGTTGCCATAGGTTACATGTATATTCTCAAACTTCACCACATGGTTGAAGATAAAATACATATGCGTTCTATCGGTCCTTATTCTCTCATCACTCAACAGCCTCTAGGTGGTAAGGCTCAAAACGGCGGGCAACGATTTGGAGAGATGGAAGTTTGGGCACTTTTGGGTCATGGAGCAAGTCATACCCTGCGTGAGATGTTGACTATAAAGTCTGATGATATTGTAGGTCGCTCCGCTACATTTGATGCCATAGTTAAAGGAGAAAAGATTCCTGAACCGCATTTGCCAGCTTCTTTTGATGTTCTTTTAAACAATCTTCGCGGTCTTTCGCTTGATGTAGAGTTGAAAAAAAATAAATTAGATAATCCTCAAGAAAATGAATAA
PROTEIN sequence
Length: 1080
MHTPSSSPKSLNNIPQPNSSNPLRVKKYFGRFRKPLAEIPNLVVSQVESFKWLIEKGLKEIFEEFSSIKDFSEKKFQLDFIGFELAEPKFDEYVAKDKKLSYEAPLKVRVRLKNLIMNTEKEQEIFMADFPLMTSHGTFIISGIERVVVPQLARSTGVSFTAQELKGKKTFGAKIIPSRGSWIEIETDLDGTIYVRIDRKRKFPVTTLLRAYGVTSNEKILSLFEKTPEAKHYIEKTLAKDHTTTIDEACIEIHKRLRDGDLAAADNAREFVHSIFDKERYDLSRVGRFRFNNRFGIKETAKEIENRTLSLSDLVLIISHIIHLNITPGSLEDDIDHLSSRRVRFVGELFQHKIRVGMAQIKRNIQNRMSTIDTDVTLPVQFISPKPLQARMKEFFTTNQLSQFMQQTNALEELEHLRTVSALGPGGLNRARAGYEVRDVHPSHYGRLCPIQTPEGPNIGLILRLATYARVNEFGMIETPYAVVKNGKITGEIKYLNALEEENFSIAHAATPVVDDKIVPEIVEVRIKGTPQTLSRDEVHFMDVATNQAFSIATSMIPFLNHDDANRALMGSNMQKQATPCIVPEVPLVATGIEEVAIRDTGRVIFSDVEGVVSYVDGKMVMVKDNKNNIHKFPLVNFSMTNGFTIFHQRPSVELGQKVKKGTVLADTSSSSDGQMSVGQNVLVAFMSWSGANYEDAIIISERLVEKSKFTSIHIEEFTINVRDTKLGPEMTTCDIPNVGESKLKNLAEDGIIRVGAEVRSGDILVGKITPKGESQLTPEERLLRSLFGEKARDVKDTSKRMEGGKRGRVVSVQIFSREKGDKLDSGVLKQINIQVAQLRNVSVGDKLAGRHGNKGVISKILPVEDMPYMADGTPIDVILTPLGVPSRMNLGQILEMHLGLAAHTLNYQAIVPPFAGATEDEIKEELVKAQFKESGKVKLFDGRTGNAFDHEVAIGYMYILKLHHMVEDKIHMRSIGPYSLITQQPLGGKAQNGGQRFGEMEVWALLGHGASHTLREMLTIKSDDIVGRSATFDAIVKGEKIPEPHLPASFDVLLNNLRGLSLDVELKKNKLDNPQENE*