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scnpilot_solids1_trim150_scaffold_378_curated_48

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 46602..47363

Top 3 Functional Annotations

Value Algorithm Source
flagellar biosynthesis protein FliR n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B79F47 similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 253.0
  • Bit_score: 269
  • Evalue 2.80e-69
type III secretion system inner membrane R protein; K02421 flagellar biosynthetic protein FliR similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 255.0
  • Bit_score: 229
  • Evalue 1.30e-57
Type III secretion system inner membrane R protein {ECO:0000313|EMBL:ACU36269.1}; Flags: Precursor;; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 255.0
  • Bit_score: 229
  • Evalue 6.00e-57

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Taxonomy

Actinosynnema mirum → Actinosynnema → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 762
ATGAGCTTCGACTTCGACCTGACCGGCCTGGTCGCGCTGCTGCTGGTGAGCGCGCGCGTGCTGGCCTGGGCGCTGGTCGCTCCTCCGATGGCCACCGCCGGAGTGCCGCGCACGGTCAAGGTCGCGTTGTCCGTCGCGATCGGGCTGGCCATGGTCTCCGTCACGAAGCCGTCGGTGCCGGCGATCGATACCCTGCCCATCATCGGCTCGCTGCTCTGGCAGATCCTGATCGGCGCCGGCCTGGGCTTCCTGACCCGGCTGCTGTTCACAGCCATCGAGATGGCCGGCGGGCTGTTCGACCTGTTCGGCGGATTCGCGCTGGCCTCGTCCTACGATCCGCTGTCCACCACCATGACGACCGTCATCGGTAAGTTCTACGCGCTACTGGCCACGGCGCTGATCTTCGCCACCAACGCGCACCTGTCCATCATCAGTGGCTTCGTGCGCACCTTCTCGGCAGTGCCGCTGAACGCGACGATCTCACTGGACGCGTTGGGCGGCGCGCTCACGCACGGCGTCACCGAGATGTTCATCGGGGCGCTGCAGATCGCCGGGCCGCTGATCGTCGTACTGTTCATCGCCGACGTCGGCCTCGGTGTGCTCAACCGCATCGCGCCGCAGCTCAACGCGTTCACGATGAGCTTCCCCATCAAGGTCGGCCTGACCCTGGTGCTGGTCGGCACCGGCATGATGCTGCTGCCGGGTACCGTGCTGCAGATCACCGGCCGGGTCGGTGACCTGATCGGGGCGGTGATCGGGTGA
PROTEIN sequence
Length: 254
MSFDFDLTGLVALLLVSARVLAWALVAPPMATAGVPRTVKVALSVAIGLAMVSVTKPSVPAIDTLPIIGSLLWQILIGAGLGFLTRLLFTAIEMAGGLFDLFGGFALASSYDPLSTTMTTVIGKFYALLATALIFATNAHLSIISGFVRTFSAVPLNATISLDALGGALTHGVTEMFIGALQIAGPLIVVLFIADVGLGVLNRIAPQLNAFTMSFPIKVGLTLVLVGTGMMLLPGTVLQITGRVGDLIGAVIG*