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scnpilot_solids1_trim150_scaffold_1081_curated_32

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(32176..33231)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Rhodococcus erythropolis RepID=UPI00036A20CB similarity UNIREF
DB: UNIREF100
  • Identity: 38.6
  • Coverage: 347.0
  • Bit_score: 238
  • Evalue 9.70e-60
Ribose transporter permease RbsC {ECO:0000313|EMBL:CDQ42581.1}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 315.0
  • Bit_score: 354
  • Evalue 2.20e-94
inner-membrane translocator; K10440 ribose transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 41.2
  • Coverage: 320.0
  • Bit_score: 235
  • Evalue 3.40e-59

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Taxonomy

Mycobacterium neoaurum → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
ATGCCCGAGTCCCATTCGGAGGACGCAACAATCGTCGCGCCTCCACCGCCGGGCGAGACTTCTGGTGCTGGCCCAGGTGGACGGCAGAAGGACTCGCGCCCCGGCATGCTGAGGTCCGCCGCCGATCCCCGCTGGTTCGGGGTCTATGCACTGATCGTGCTGGTGGTGTTCTTCAGCATCCGATTCAACATCACCTTCTTCAGCCTGGCGAACTTTCAGGCGATCCTGAGCAATGAAGCGGTCGGCATCATTCTCGCCCTGGCCCTGTTGATCCCGCTAGTCGTGGGGCAGTACGACCTGTCCTTCGCCAGTACGCTCACCCTGTCGTTGATCACGGTGACGGGCCTTTTCCAGCAACACGCTGCGCCGGTCTGGCTCGCGGTCGTCGGCGGAGTACTGGTCGGTGCCGTCGTCGGCGCCGTGAACGGGTTCAGCATCGTCTATCTGCGAGTCAATTCGCTGATCAGTACGCTCGCGACCGGAAGCATCGCGCTCGGGGTCGCTCAGTGGTGGACGAACGGCCGCATCTTCTCCGGGGGCATGCCGGCGGGCTTCTCGGACTTCGGCAACAGCTTTCTGTGGATCATTCCCATGTCGGCGCTGATCGCCGGGGTGCTCGCGTTGGTGGCGTGGTTCGTGCTGGAGCGCATGTCCCTGGGGCGCTATCTCTACGCCATCGGCGACAACCCTACTGCGGCACGCACTATTGGCCTGCCCGTCGGCGGCCTCACTTTCGGGGCCATGGTCATCGGCGGCTGTCTGGCGGGGCTCGCGGGTGTCGTTGCGGCCGCGAAGTTCGGTTCCGGGAACCCGACCATCGGACCGGGCTACCTGCTGCCGGCGTTCAGTGCCGTTTTTCTCGGCAGCACCATCTTCCGATTGGGCCGTTACAACGTCGTGGGCACGATCGTCGCGGTCCTGCTGCTCGCCGTACTGCTGAGCGGACTGACACAGTTCGGTCTTCCGTTCTACATCTCGCCGCTGCTGACCGGTGTCGCGCTGCTGGGCGCAGTCGCGGTCACCCTGGGCAGGCACCTCCGCAAGGTCAACTCCTGA
PROTEIN sequence
Length: 352
MPESHSEDATIVAPPPPGETSGAGPGGRQKDSRPGMLRSAADPRWFGVYALIVLVVFFSIRFNITFFSLANFQAILSNEAVGIILALALLIPLVVGQYDLSFASTLTLSLITVTGLFQQHAAPVWLAVVGGVLVGAVVGAVNGFSIVYLRVNSLISTLATGSIALGVAQWWTNGRIFSGGMPAGFSDFGNSFLWIIPMSALIAGVLALVAWFVLERMSLGRYLYAIGDNPTAARTIGLPVGGLTFGAMVIGGCLAGLAGVVAAAKFGSGNPTIGPGYLLPAFSAVFLGSTIFRLGRYNVVGTIVAVLLLAVLLSGLTQFGLPFYISPLLTGVALLGAVAVTLGRHLRKVNS*