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scnpilot_solids1_trim150_scaffold_1235_curated_11

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(11943..13112)

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUT8_RUBXD similarity UNIREF
DB: UNIREF100
  • Identity: 48.2
  • Coverage: 309.0
  • Bit_score: 285
  • Evalue 7.70e-74
periplasmic binding protein/LacI transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 309.0
  • Bit_score: 285
  • Evalue 2.40e-74
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:ABG04840.1}; Flags: Precursor;; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.2
  • Coverage: 309.0
  • Bit_score: 285
  • Evalue 1.10e-73

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Taxonomy

Rubrobacter xylanophilus → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1170
ATGATGAACAGGTACAAGCGCCGATTGGTGCTCACGGCGATCGCGGGTGCTGCCGCACTCATGATCACAGCATGTGCGAGTGGTGGAACGTCCGCCACTACCGATTCTTCGGGGACTTCAGACGGTACGGCAGACTCATCTTCTTCGACTCCGAGTTCGTCGCAGCGCACAGATTCGAGCAGCTCGGAGATTTCCTCGGCTGCCACACCCGACACCTCGAGTTCGTCGACGGCGCCCACCGGTGAATCCGCAGCTTTGGAAGGGTTCACACTCGCGCCCTACATCGCCAAGCACGTCGCCGACGGAACCAAGCTCAACTTCGTGTACATCACCAACGACTTGTCCAGCTCGTACACGGCCGCCCAAAAGGCCGGCGTCGACAAGGCGGTCGCCGACCTGGACGTCAACGCAGAGCTTCAGGGCCCGCCGACGGGCAAGGCCGAAGACCAGGTCTCGCTAATCCAGACGCTAATTGCACAGAAAAAGGTGGACGGCATCGTCGTAGCAGCAGTGAACGTAGACTCGCTCAAACCTGTTATCCAACAGGCCTTCGACGCAGGTATCCCATTCGTGTCGGCGTTCACGGATCAGCCCAACTCGAAGCAGCTCGCCTTCGTCGGCGCGGACAACGAGAAATTTGGGCACGAGCTGGGCGAGCGATTCGCGAAGGCACTAGATGGCCAGTCAGGCAAGGTGGTAGCAGTCTCGGTCGATACTGCCGCTGGATGGTCGACCGCGCGGATGAAGGGCTTGAAGGAGGGCATGGCTTCGGTGAACTCAGGATTGGAGTTTGTGGGGCCGATAAACACTGGTATCGAACCGGGCCAAATGTATAACGCGATTCAGAACGCAATGACGGCCAACCCCGACGCGATCGGTATTGCCTCGGTGGATTGTTGCAGTGTCGATGGGGCCGCGAAGTGGGTCGAGAACCAGGGCAAGACGGGGAAGGTCCTGGTCACCGGAACTGACGCACTGCAACAGACCCTGGACTACATCAAGAAGGGTGTGATTCCGTTCGTCCTGAGCCAGGACCCAGTCGGTCAGGTATACACGGCGATCAGCCAGATCAAGGACTTTGTTACAAATGGGACGGCACCGCACACTTTGATCATGCCGGCACTTCTTGTCGATAAGACCAATGCCGACTCAGTCACTCCAGAAGGATGA
PROTEIN sequence
Length: 390
MMNRYKRRLVLTAIAGAAALMITACASGGTSATTDSSGTSDGTADSSSSTPSSSQRTDSSSSEISSAATPDTSSSSTAPTGESAALEGFTLAPYIAKHVADGTKLNFVYITNDLSSSYTAAQKAGVDKAVADLDVNAELQGPPTGKAEDQVSLIQTLIAQKKVDGIVVAAVNVDSLKPVIQQAFDAGIPFVSAFTDQPNSKQLAFVGADNEKFGHELGERFAKALDGQSGKVVAVSVDTAAGWSTARMKGLKEGMASVNSGLEFVGPINTGIEPGQMYNAIQNAMTANPDAIGIASVDCCSVDGAAKWVENQGKTGKVLVTGTDALQQTLDYIKKGVIPFVLSQDPVGQVYTAISQIKDFVTNGTAPHTLIMPALLVDKTNADSVTPEG*