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scnpilot_solids1_trim150_scaffold_1078_curated_24

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(33609..34844)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B3FEB4 similarity UNIREF
DB: UNIREF100
  • Identity: 48.2
  • Coverage: 365.0
  • Bit_score: 368
  • Evalue 1.20e-98
periplasmic binding protein/LacI transcriptional regulator; K10439 ribose transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 358.0
  • Bit_score: 339
  • Evalue 1.10e-90
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:ADB33225.1}; Flags: Precursor;; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.3
  • Coverage: 358.0
  • Bit_score: 339
  • Evalue 5.10e-90

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Taxonomy

Kribbella flavida → Kribbella → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1236
ATGGAACATCGCATTCTGCACATCCAGTCGCCATCGCGCCGCCGCCGGGTCGGCTACCTGCGCATGAGCGCCTTCGCACTCGCCACGGCGCTCGCGGTGAGCGCCTGCGCCTCCACGAGCTCGGCGGGGGACGCGGCCAGTACGGCGGCAGCAGACACGAATTCGCAGGCGGCGGATGCCGGTTCGACCGAAGCGGCCGCGGCCAGCAGCGACTCCAGCGCCGCGGGGAGCACATCAGGCGCCGCTACGAGCGCCTGCGCGTCGGGCAAGTACAAGACGGTCGTTCAGGTCCGCGACAACGTCAATCCCTTCTATACATCTTGGCTGGCCGGTGGCAAGGCGTTCTCCGACTCGGTCGGCGCCACCCAGACCGACCTCACGTACGACAATGATTCGTCCAAGCAACAGCAGCAGATCAAGCAGCTCCTGGCGAGCATCAGTCCCGACGAAGCGCCCTGCTACATCCTCAACATCCTGCCGAACAACGACTCCGATGCGGCGCCCGTCGTCAAGGAGGCCACGGACGCGGGTGTGCTCGTGGTGACGCAGTGGAACAAGCCCGCCGACCTGCACCCGTGGGACGGCTACGACACCTGGGTCGCGAACGTGGCCTTCGACGGCAAGTGGGTGGGCTACACCATGGCCAAGACGCTGTTCGACGCAATGGGCGGGACGGGCAACATCATCGAGTTGCACGGCCAGTTGGACTCGTCCGCGGACAAGGACCGCTCGGAGGGCCTGAAGAAGGCACTGTCCGAGTACCCGAACATCAAGGTCCTCGACTCTCAGTCGGGTGACTTCGTGCGCGCCGAGGGACTGAGCATCACCAAGACCCTGATCACCAAGTACGGCAACGACATCAACGGCATCTGGTCGTCGAACGACGATATGGCTCTCGGCGCGCTGCAGGCCCTGCAGACGGCGGGCATGAACGACGTCAAGATCACTGGAACGGACGCGGTTCCGGAGGCGCTCGATGCCATCAAGGCCGGAAAGATGCTGGCCACCACCGCCAGCGACCCGACCTGGCAAGGCGGCGAGGGACTGGCCCTCGGGTACTGCGTGGCGACCGGCGCCCTGAACATCGCGTCGATGCCGCACACGCAGCGCGAGTTCTACGCGAAGCAGTTCTCGATTACGAAGGACAATGTTGACGAGTTCGCCGCCAGCAAGCTCGACGTCGGCGAGTACGACTGCAACAAGGTCTTCGATCGCGCTACAGAGCCGATTGGATGA
PROTEIN sequence
Length: 412
MEHRILHIQSPSRRRRVGYLRMSAFALATALAVSACASTSSAGDAASTAAADTNSQAADAGSTEAAAASSDSSAAGSTSGAATSACASGKYKTVVQVRDNVNPFYTSWLAGGKAFSDSVGATQTDLTYDNDSSKQQQQIKQLLASISPDEAPCYILNILPNNDSDAAPVVKEATDAGVLVVTQWNKPADLHPWDGYDTWVANVAFDGKWVGYTMAKTLFDAMGGTGNIIELHGQLDSSADKDRSEGLKKALSEYPNIKVLDSQSGDFVRAEGLSITKTLITKYGNDINGIWSSNDDMALGALQALQTAGMNDVKITGTDAVPEALDAIKAGKMLATTASDPTWQGGEGLALGYCVATGALNIASMPHTQREFYAKQFSITKDNVDEFAASKLDVGEYDCNKVFDRATEPIG*