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scnpilot_solids1_trim150_scaffold_439_curated_4

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(4695..5165)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M1F9_ACIFD similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 156.0
  • Bit_score: 144
  • Evalue 6.50e-32
XRE family transcriptional regulator; K07075 similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 156.0
  • Bit_score: 144
  • Evalue 2.10e-32
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACU53008.1}; TaxID=525909 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;" source="Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC; 103882 / ICP).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 156.0
  • Bit_score: 144
  • Evalue 9.20e-32

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Taxonomy

Acidimicrobium ferrooxidans → Acidimicrobium → Acidimicrobiales → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 471
ATGTCGCAGGCGGAATTGGCGGTCCGGGCGGGCACGACTCAGAGCGTGATCAGCGTGTATGAGTCGGGTCGGCGACAGCCGTCGTTGCCGACGCTGATGTCGCTTGTTGAGGCGACCGGCATGCATTTGAATGTCGAACTCTCAGACGGGCAATCCGGAGTTCCAGTCAAGGTCCAGGGGGGCAGTTTAGCGCGACGTGTCCGGGATAACGCCGATCAGATTCATGATGCCGCAACAGAATCGGGGGTGAGAGTGCTGGGCTTGTTCGGAAGCGCAGCGCGCGGTGAGGACGGACCGGACAGCGATGTCGATCTGTTGATCGACGTACCAGACGGAGTGGGACTGTTCGCCCTTGGGCGGTTGGAGACGAAACTTCGTGGCATTCTGGGCGCGGAGGTCGACCTGGTCCCGGTCTCTGGCCTGAAGCCTCGGGTTCGGCATGAAGTGATGGCTGAGGTTCGGCCGCTGTGA
PROTEIN sequence
Length: 157
MSQAELAVRAGTTQSVISVYESGRRQPSLPTLMSLVEATGMHLNVELSDGQSGVPVKVQGGSLARRVRDNADQIHDAATESGVRVLGLFGSAARGEDGPDSDVDLLIDVPDGVGLFALGRLETKLRGILGAEVDLVPVSGLKPRVRHEVMAEVRPL*