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scnpilot_solids1_trim150_scaffold_8735_curated_3

Organism: solids_Brevundimonas_1

near complete RP 43 / 55 MC: 1 BSCG 45 / 51 MC: 1 ASCG 7 / 38 MC: 2
Location: comp(783..1217)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding transcription factor DksA n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQG3_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 144.0
  • Bit_score: 280
  • Evalue 7.10e-73
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 144.0
  • Bit_score: 280
  • Evalue 9.90e-73
TraR/DksA family transcriptional regulator; K06204 DnaK suppressor protein similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 144.0
  • Bit_score: 262
  • Evalue 6.30e-68

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 435
ATGACCGCATTGGCCTCTGTAGTGTCCGGGGATACGGCTGTTTATCGGCCGACCGACGACGAGCCGTTCATGAACGAACGGCAGGTCGCCTATTTCAAGAACAAGCTTTTGTCCTGGAAAGACGACATTCTTCGCGAGTCGAAGGGCACTGTCACCAATCTGAAAGCCGAGACCGAGAACCATCCTGACTTGGTGGATCGGGCCTCATCGGAATCCGATCGCGCGCTGGAGCTTCGGACTCGCGACCGGCAACGCAAGCTGATCTCGAAGATCGATGATGCGCTGCGCCGGATCGAGGACGGCACCTACGGCTACTGTGAGGATACCGGCGAGCCGATCGGGCTGGGTCGTCTGGAGGCTCGCCCGACGGCGACCTTGTCAGTGGAGGCTCAGGAGCGGCATGAACGTCGTGAGCGGGTCCACCGCGACGACTGA
PROTEIN sequence
Length: 145
MTALASVVSGDTAVYRPTDDEPFMNERQVAYFKNKLLSWKDDILRESKGTVTNLKAETENHPDLVDRASSESDRALELRTRDRQRKLISKIDDALRRIEDGTYGYCEDTGEPIGLGRLEARPTATLSVEAQERHERRERVHRDD*