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scnpilot_solids1_trim150_scaffold_19247_curated_1

Organism: solids_Brevundimonas_1

near complete RP 43 / 55 MC: 1 BSCG 45 / 51 MC: 1 ASCG 7 / 38 MC: 2
Location: comp(1..1179)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 393.0
  • Bit_score: 779
  • Evalue 2.40e-222
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 394.0
  • Bit_score: 702
  • Evalue 8.40e-200
DNA-directed RNA polymerase subunit beta n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1I9_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 393.0
  • Bit_score: 779
  • Evalue 1.70e-222

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
ATGGCCAAGTCCACCGACGGTCTCGCCTTGGGTAAGATCGCTGCCGCCACGTCGTTCACCGGCAAGAAGCGCATTCGCTACAGCTTCGGGCGCATCCCCGAAGCCGTGCAGATGCCGAACCTGATCGAGGTTCAGCGCGCTTCCTATGAGCAGTTCCTGCAGCGCGAGTCGCGCCCGGGCCTGCGTAACGACGAGGGCATTGAAGCGGTCTTCAAGTCGGTCTTCCCGATCAAGGACTTCAACGAACGCGCCGTCCTGGAATACGTCTCCTACGAGTTTGAAGACCCGAAGTACGACGTCGAGGAATGCATCCAGCGCGACATGACCTATGCCGCGCCGCTGAAGGTCAAGCTGCGCCTGATCGTGTTCGAGACCGAGGAAGAAACGGGCGCCCGTTCGGTCAAGGACATCAAGGAGCAGGACGTCTACATGGGCGACATCCCGCTCATGACGGACAAGGGCACCTTCATCGTCAACGGCACCGAGCGCGTGATCGTCTCGCAGATGCACCGCTCGCCGGGCGTCTTCTTCGACCACGACAAGGGCAAGACCCACTCGTCGGGCAAGCTGCTGTTCGCCGCCCGCGTCATTCCCTACCGCGGCTCGTGGCTGGACTTCGAGTTCGACGCCAAGGACATCGTCTACGTCCGCATCGACCGCCGCCGTAAGCTGCCTGCCACCACCTTCCTCTATGCCCTGGGCATGGACGGGGAAGAGATCCTCAAGACCTTCTACGAGACCGTCCCCTACGAGAAGCGCGGCGAAGGTTGGGTCACCCCCTACAAGCCGGAGCGCTGGCGCGGCGTGAAGCCGGAGTTCGATCTGGTCGACGCCGACACCGGCGAAGTGGTCGCTCCGGCCGGTCAGAAGATCAGCGCCCGCGCCGCCAAGAAGCTGGCCGACGGCGGCCTGAAGTCGCTGTCGCTGGCGGCTGACGCCCTGCTGACCAAGTATCTGGCCGCTGACGCCGTCAACTACCAGACTGGCGAGATCTACGCCGAGGCGGGCGACGAGCTGGACGCCGCCGCGATCGAGCTGCTGGAAGCCAACGGCTTCACCACCATCGACGTGCTGGACATCGACCACGTGACGGTCGGCGCCTACATGCGCAACACTCTGCGCGTGGACAAGAACACGGGCCGCGAGGACGCCCTGTTCGACGTCTATCGCGTCATGCGC
PROTEIN sequence
Length: 393
MAKSTDGLALGKIAAATSFTGKKRIRYSFGRIPEAVQMPNLIEVQRASYEQFLQRESRPGLRNDEGIEAVFKSVFPIKDFNERAVLEYVSYEFEDPKYDVEECIQRDMTYAAPLKVKLRLIVFETEEETGARSVKDIKEQDVYMGDIPLMTDKGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAARVIPYRGSWLDFEFDAKDIVYVRIDRRRKLPATTFLYALGMDGEEILKTFYETVPYEKRGEGWVTPYKPERWRGVKPEFDLVDADTGEVVAPAGQKISARAAKKLADGGLKSLSLAADALLTKYLAADAVNYQTGEIYAEAGDELDAAAIELLEANGFTTIDVLDIDHVTVGAYMRNTLRVDKNTGREDALFDVYRVMR