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scnpilot_solids1_trim150_scaffold_14139_curated_3

Organism: solids_Brevundimonas_1

near complete RP 43 / 55 MC: 1 BSCG 45 / 51 MC: 1 ASCG 7 / 38 MC: 2
Location: comp(1461..2123)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QV67_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 207.0
  • Bit_score: 397
  • Evalue 7.90e-108
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:EGF96496.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 207.0
  • Bit_score: 397
  • Evalue 1.10e-107
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 209.0
  • Bit_score: 301
  • Evalue 1.90e-79

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
CGATTGATCCAGACTTTTGCGCGAAGCGTATTAGGCTCCATGCATGTCGAGGCTCCGTCTTTCGCATCCCCTGAACAGCGCGTCGGCGTAATGAGCGACGAGGCTGAAGGCGCGCTTGAGCATGATCGGCTGATCGAGGCGGTGGCCCTTCGCCGCGATCGCGAAGCCTTCGCCCGCTTGTTCGAACATTTCGCCCCGCGCCTGAAGGCCTGGCTGATGAAGTCGGGCGCGACGGCCGCCGCGGCCGAGGACTTCGCCCAGGACGCCATGCTGACCGTCTGGCGCAAGGCGGACCTGTTCGACGCCCGCAAGGCGCGGGCCGCGACCTGGATATTCACCATCGCTCGCAATCGCCGCCTGGACATGCTGCGACGCGACGCCCGCGCCCTGCCCACGCCCGAGATCGAACCGACCGAGGACGAGGCGATGCGGCCCGACGCCATCCTGGCCATGGCGGACGACGCCCGGCGGGTGCGCGAAGCCCTGTCCCGGCTGAAGCCCGATCAGATCGAAGTCCTGCGCCTGGCCTTCTTCATGGACAGCCCCCATTCCGAAATCGCCCAGCGGCTCGACCTGCCGCTGGGCACGGTCAAATCCCGTATCCGCAACGCCATGATCAAGCTGCGCACGATCCTTGAACCGTCAGAGGAGGCGTCGCGATGA
PROTEIN sequence
Length: 221
RLIQTFARSVLGSMHVEAPSFASPEQRVGVMSDEAEGALEHDRLIEAVALRRDREAFARLFEHFAPRLKAWLMKSGATAAAAEDFAQDAMLTVWRKADLFDARKARAATWIFTIARNRRLDMLRRDARALPTPEIEPTEDEAMRPDAILAMADDARRVREALSRLKPDQIEVLRLAFFMDSPHSEIAQRLDLPLGTVKSRIRNAMIKLRTILEPSEEASR*