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scnpilot_solids1_trim150_scaffold_6537_curated_4

Organism: solids_Burkholderiales_2

partial RP 32 / 55 BSCG 32 / 51 MC: 1 ASCG 10 / 38
Location: comp(2504..2899)

Top 3 Functional Annotations

Value Algorithm Source
FeS cluster assembly scaffold IscU n=1 Tax=Variovorax sp. CF313 RepID=J2L3U0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 131.0
  • Bit_score: 160
  • Evalue 9.70e-37
FeS cluster assembly scaffold IscU; K04488 nitrogen fixation protein NifU and related proteins similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 131.0
  • Bit_score: 160
  • Evalue 3.00e-37
FeS cluster assembly scaffold IscU {ECO:0000313|EMBL:ADU37932.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 131.0
  • Bit_score: 160
  • Evalue 1.40e-36

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
ATGGCGTATTCACCGCAGCTCATCGACCATTTCGAACACCCGCGCAACGTAGGCTCGCTGGACGAACGCCACGGCGACGTGGGCACGGCGCTGGTGGGTTCGCCCCAGGTGGGTGAAGTGATCAAGCTGCAAATCCGGATCGACCCCGCCGCGGGTCTGATCGATCAAGCCTGCTTCAAGGCGTACGGCAGCAGTGCGGCGATTGCCGCTTCGTCGCTGGCTACCCAGTGGCTGCACGGCCGATCGCTCGATGCGGCGGCCGCGATCACCCACGCCGACATCACGCGCGAGCTGGCGCTGCCGCCCGAGCGCATGCATTGCGCCATCCTCGTCACGCAGGCGATCAAGGCTGCCGTGAGCGACTACCAAGCCAAACACAACACACGGACTGCCTGA
PROTEIN sequence
Length: 132
MAYSPQLIDHFEHPRNVGSLDERHGDVGTALVGSPQVGEVIKLQIRIDPAAGLIDQACFKAYGSSAAIAASSLATQWLHGRSLDAAAAITHADITRELALPPERMHCAILVTQAIKAAVSDYQAKHNTRTA*