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scnpilot_solids1_trim150_scaffold_8958_curated_8

Organism: solids_Burkholderiales_2

partial RP 32 / 55 BSCG 32 / 51 MC: 1 ASCG 10 / 38
Location: comp(6516..7082)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q8Q3_ACIAP similarity UNIREF
DB: UNIREF100
  • Identity: 55.0
  • Coverage: 200.0
  • Bit_score: 196
  • Evalue 1.70e-47
two component sigma54 specific transcriptional regulator; K02667 two-component system, NtrC family, response regulator PilR similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 200.0
  • Bit_score: 196
  • Evalue 5.50e-48
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ADX44721.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 200.0
  • Bit_score: 196
  • Evalue 2.40e-47

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Taxonomy

Acidovorax avenae → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
GCCGACGTGCACAGCGGACGCTTTCGCCAGGACCTGTACTACCGGCTCAATGTCATCGAGCTCTTCATCGCCCCGCTGCGCGAACGCCTGGACGACCTGCCCGTGCTCTGCGACGCACTGCTCGAGCGTCTGGCGCGTGAATCGGGCATGAGCGCCCCCGTGCTGGACGCCCAAGCATTGATGCATTTGGCACAGTACCCCCTCGCCGGCAACGTGCGCGAGCTGGAAAACCTGCTGCATCGGGCGCTGGCGCTGACCGATGGAGGGCCGCTGCAAATTCCCGCGTTCACCCCCGGCGCTCAGGCCAGCGCGGCCTCACCCGCCGCCCCCCGGCCCGCCGCCATCGAAGAGCCGTCGGCACTACCCACGGGCGCGGCGCACCCGTTGCTGGCCTGGCTCGATGACCGTGAACGCGAAATCCTCGTGCGCACGCTGGGCGAATGCGGGCACGATCAGGCATCGGTGGCGCAGCGCCTGGGCCTGAGCGCGAGGCAGTTGCACTACCGCCTCAAGCGTCTCGGACTGACCGATGCAGACCACGCGCCAGAAGATGAAGCGCAGGGCTGA
PROTEIN sequence
Length: 189
ADVHSGRFRQDLYYRLNVIELFIAPLRERLDDLPVLCDALLERLARESGMSAPVLDAQALMHLAQYPLAGNVRELENLLHRALALTDGGPLQIPAFTPGAQASAASPAAPRPAAIEEPSALPTGAAHPLLAWLDDREREILVRTLGECGHDQASVAQRLGLSARQLHYRLKRLGLTDADHAPEDEAQG*