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scnpilot_solids1_trim150_scaffold_2707_curated_1

Organism: solids_Burkholderiales_2

partial RP 32 / 55 BSCG 32 / 51 MC: 1 ASCG 10 / 38
Location: 357..935

Top 3 Functional Annotations

Value Algorithm Source
prepilin-type cleavage/methylation; K08084 type IV fimbrial biogenesis protein FimT id=12553916 bin=BDI species=Comamonas testosteroni genus=Comamonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 176.0
  • Bit_score: 184
  • Evalue 1.20e-43
Prepilin-type cleavage/methylation {ECO:0000313|EMBL:EFI62192.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni S44.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.5
  • Coverage: 189.0
  • Bit_score: 173
  • Evalue 2.30e-40
type-4 fimbrial pilin related signal peptide protein; K08084 type IV fimbrial biogenesis protein FimT similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 180.0
  • Bit_score: 170
  • Evalue 7.30e-40

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Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGCACACTTTTGGCTCACCTTGCTTTCGCAGAAGCGGCGTCGATGTCCGTGGCTTCACGGCCATCGAGCTGATGGTCACCGTTGCCATCGTGGCCATCTTGACGGCCTTGGCGGCACCCAGTTTTACGTCGCTGCTCGATAAATGGCGGGTACGCAGTGCGGCTGAGGCGCTGCAGAACACGCTGTACTTCGCGCGCTCCGAGGCCATCAAGCGCGGAGGCGGCATCGCCGTGGCCAAGTTGGGGAACACTTCGGGGGGCTGTCAGAACGCCGGCACCACCCAGGAATGGGGCTGCGGATGGATTGTCTTTGTCGATGCGAACGACAACGGCACCTTCAACAGCAGTACGGAGCTCAAGCTGCGTGATACCGGCCTGGACGGTGCCGTGAACGTTATGCGCTATCCATCGGGCAACTTCGTGGAAGTCGATCGTTATGGCATGGCCAACGGCAACAACACCTTGCGTTTCGTCCTTTCTCCTGCCGCAACCGGTGTCAGTTCCCCGGCCGTGACCACCCTGTGCATGGGCGCCGGCGGTCGCATTCGGATCCTGAATGGCGAGGTGAGTTGCACATGA
PROTEIN sequence
Length: 193
MHTFGSPCFRRSGVDVRGFTAIELMVTVAIVAILTALAAPSFTSLLDKWRVRSAAEALQNTLYFARSEAIKRGGGIAVAKLGNTSGGCQNAGTTQEWGCGWIVFVDANDNGTFNSSTELKLRDTGLDGAVNVMRYPSGNFVEVDRYGMANGNNTLRFVLSPAATGVSSPAVTTLCMGAGGRIRILNGEVSCT*