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scnpilot_solids1_trim150_scaffold_1_curated_18

Organism: solids_Castellaniella_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 15511..16215

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000313|EMBL:CDM24223.1}; EC=4.2.1.70 {ECO:0000313|EMBL:CDM24223.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 234.0
  • Bit_score: 417
  • Evalue 1.10e-113
pseudouridylate synthase; K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 234.0
  • Bit_score: 351
  • Evalue 1.70e-94
RNA pseudouridylate synthase n=1 Tax=Pusillimonas noertemannii RepID=UPI00035F6DF5 similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 234.0
  • Bit_score: 354
  • Evalue 1.10e-94

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGGCCCAGCGCGGCCTGTGCTCCCGCCGCGAGGCCGACGCCTACATCGAGCGCGGCTGGGTCCGCGTGGATGGCCAGATCGTGCGCGAACTGGGCACCAAGGCGCTGCCCAATGCCCGCATTTCGCTGGAGCGGCAGGCGGCGCGGCGCCAGACCGACAAGGTTACGATCATCCTGAACAAGCCCGTCGGCTACGTGTCGCACCAGGCCGACCATGGCTATCGCCTGGCGGCGTCCCTGGTGCGGGCGGATACCCAGTATCACGCAGGGCAGGCGCGGCGCGCCTTCGACCCGGCGCACGTGCGCGGCCTGGCGCCGGCGGGCCGCCTGGACATCGATTCCCAGGGGCTACTGGTGCTGACCCAGGACGGGCGCATCGCCCGCCAGCTGATCGGCGACGATTCCGGCATCGAAAAAGAATATCTGGTGCGGGTCGACGGCCGTCTGTCGTCCGGCGGCCTGGCGCTGCTGAATCACGGCCTGATGCTCGACGGCCAGGCGCTGCGCCCGGCCAAGGTCCGCTGGCAGAACGAGGACCAGCTGCACTTCATCCTGCGCGAGGGCCGCAAGCGGCAGATCCGGCGCATGTGCGAACAGGTCGGCCTGAAAGTCGTCGGCCTGAAGCGGGTGCGCATGGGGCAGGTCGTGCTGGGCGACCTGCCGCTGGGCCAGTGGCGCTATCTGCGCGAAGGCGAACGCTTCTGA
PROTEIN sequence
Length: 235
MAQRGLCSRREADAYIERGWVRVDGQIVRELGTKALPNARISLERQAARRQTDKVTIILNKPVGYVSHQADHGYRLAASLVRADTQYHAGQARRAFDPAHVRGLAPAGRLDIDSQGLLVLTQDGRIARQLIGDDSGIEKEYLVRVDGRLSSGGLALLNHGLMLDGQALRPAKVRWQNEDQLHFILREGRKRQIRRMCEQVGLKVVGLKRVRMGQVVLGDLPLGQWRYLREGERF*