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scnpilot_solids1_trim150_scaffold_14896_curated_2

Organism: solids_Castellaniella_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(1853..2140)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA022 RepID=U8RHT4_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 90.0
  • Bit_score: 186
  • Evalue 1.20e-44
putative conjugal transfer TrbD transmembrane protein; K03198 type IV secretion system protein VirB3 similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 90.0
  • Bit_score: 186
  • Evalue 4.90e-45
Conjugal transfer protein TrbD {ECO:0000313|EMBL:KEH08426.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 90.0
  • Bit_score: 186
  • Evalue 2.20e-44

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Taxonomy

Delftia tsuruhatensis → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 288
CGGCGGGGCCGTCGTATGAGTGCCCCGGACACCTTCGCGGACGGCTTCGAGGTGCCGCTGCATCGCTCGCTGACCGAGCCGATTCTGCTTGGCGGTGCGCCGCGCACGGTGGCGATCGCCAACGGCACGCTGGCCGCCGCTGTCGGCCTGGGCCTGCAACTGTGGATTCCGGGCGTGGTGCTCTGGGTTGTCGGCCATTCGCTGGCGGTATGGGGCGCGCGCGTCGATCCGCAGTTCATGCAGGTCTTCGCCCGGCACATCAAGCACCGCCCGCTACTGGACGTGTGA
PROTEIN sequence
Length: 96
RRGRRMSAPDTFADGFEVPLHRSLTEPILLGGAPRTVAIANGTLAAAVGLGLQLWIPGVVLWVVGHSLAVWGARVDPQFMQVFARHIKHRPLLDV*