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scnpilot_solids1_trim150_scaffold_268_curated_6

Organism: solids_Castellaniella_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(4003..5172)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X203_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 388.0
  • Bit_score: 439
  • Evalue 4.20e-120
Extracellular ligand-binding receptor {ECO:0000313|EMBL:CDM22712.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 389.0
  • Bit_score: 730
  • Evalue 1.30e-207
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 382.0
  • Bit_score: 409
  • Evalue 1.10e-111

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1170
ATGGCATTTCGCAAAACGATGCTGACGGCCGCCCTGACCCTGTCGCTGGGGCTGACCGCGGGGTCGGCGCTGGCTGAAGTCAAGATCGGTTTTCTGGCCACCTTGTCCGGCGCCGGCGCGGCTCTGGGCCAGGACATGGTGGACGGCTTCAACCTGGCGCTGGAAGAACGCGGCGGCAAGCTGGGCGGTCAGGACATCGTCTTTCTGAAGGAAGACGATCAGCTCAAGCCCGACGTGGGCGTGCAGGCGGTGCAGAAATTCCTGGAAAAGGACAAGGTCGATCTGGTGGCCGGCGTCACGTTTTCCAACGTCATGATGGCCATCGCCAAGCCGCTGGCCGATGCCGGCATGACCTTCGTCGGCTCCAACGCCGGCCCGGCGCCGCTGGCGGGCAATCAGTGCAATCCCGGCTTCTTTTTCGCCTCCTGGCAGAATGACGGGCAGGCCGAAGTCATGGGTCAGTTCGCCACCGACCAGAAATACAAAGACGTCTACATGATCACCCCCAACTACCAGTCGGGCCGCGATCAGGTGAAGGGCTTCACGCGCTTCTACAAGGGCCGCGTCTCGGGCGAGGTCTACACCCAGCTGGGCCAGCAGGATTATTCGGCGGAACTGCTGGCGCTGCAGGCCGCCAATCCGGCCGCCGTCTGGGTCTTCCTGCCCGGCGGCATGGGCGTGAACTTCGTCAAGCAGTACAAGCAGTTCGGCCTGATGGGCAAGATCCCGCTGCTGACGGTGTCCACGGTGGACGGCAGCACCCTGCCGGCCCTGGGCGACGCCGCCCTGGGCGCCTATGCGGGCACGTTCTGGGGGCCGGACTTCAAGAATCCCACCAGCGAGGCCTTCGTCGCCGCCTTCGAGAAAAAATACAAGCGCATCCCTTCGCAGTATGCCGCGCAGTCCTATGATTCGGCCCTGCTGATCGACAGCGCCCTGAAGAAGACCGGCGGCAAGGTCAGCGACAAGAAGGCGTTCCGCGATGCGCTGCGGGCCGCCGATTACGCCTCCCTGCGCGGGGCCTACAAGTTCAACGTCAACGGCTTCCCGATCGAGGACTTCTACGCCTTCGAGGTCGCCAAGGACGCGCAGGGCCGGGTGTCGCTGAAGACCATCGCCAAGCCCCTGACGAATCACGCCGACGCGTATTCCAAGAACTGCAAGTACTGA
PROTEIN sequence
Length: 390
MAFRKTMLTAALTLSLGLTAGSALAEVKIGFLATLSGAGAALGQDMVDGFNLALEERGGKLGGQDIVFLKEDDQLKPDVGVQAVQKFLEKDKVDLVAGVTFSNVMMAIAKPLADAGMTFVGSNAGPAPLAGNQCNPGFFFASWQNDGQAEVMGQFATDQKYKDVYMITPNYQSGRDQVKGFTRFYKGRVSGEVYTQLGQQDYSAELLALQAANPAAVWVFLPGGMGVNFVKQYKQFGLMGKIPLLTVSTVDGSTLPALGDAALGAYAGTFWGPDFKNPTSEAFVAAFEKKYKRIPSQYAAQSYDSALLIDSALKKTGGKVSDKKAFRDALRAADYASLRGAYKFNVNGFPIEDFYAFEVAKDAQGRVSLKTIAKPLTNHADAYSKNCKY*