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scnpilot_solids1_trim150_scaffold_144_curated_29

Organism: solids_Castellaniella_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(32938..35193)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein PgaA n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T5B4_ALCXX similarity UNIREF
DB: UNIREF100
  • Identity: 51.8
  • Coverage: 736.0
  • Bit_score: 756
  • Evalue 3.00e-215
Biofilm PGA outer membrane secretin PgaA {ECO:0000313|EMBL:CDM25916.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.3
  • Coverage: 743.0
  • Bit_score: 831
  • Evalue 7.80e-238
Biofilm PGA outer membrane secretin PgaA similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 753.0
  • Bit_score: 750
  • Evalue 5.10e-214

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2256
TTGTATCCCCGCCTGTCGCCCGCCGTGTTTACATTTTGTGCGATATTGGCACTACCCGGCATAGGCTTGTGTGCGTCGATACAAGATTACGACACGCTGCTACAGTCCGCGCGCGCTCATCGGGACGCCCAGCAATGGAACGACGCCATCAGGCTCTTTCGCGAGGGCGAGCAGCGGTTCCCGCAGCAAAACGCCTTCACCTACGGCCATATCATGACATTGGCCGATGCCGGACGCACGGACGAGGCGATCCAGCGAGGCAGCGAACTGGTGTCCCGCAAGCCCGGCGACGCCGACAGCCACCTGGTGCTGGAATATGCGTACCAGCAGGCCCGCCAGCCCTACGCCGCGCTGGAACAGGCGTCGCAGGCCCACGACCTGGCGCCGAACAAGGCGTATGTAGTGCGCGCCTACGTCCTGGCGCAACAGCGCGCCCAGCTGCCGCAGGCCGCCCTGCGCACGGCGCAGGACCACCCCGGCATCCTGGAGTCCTCCCGGATCCGCTCGCTGCAGGCTGACGTCGCCGCCCAGTTGACCCGCGCAGCAACCACCGAATCCCGGGGAGAAGCCAGCCGCTTCGTCCTGGCGGACCAGGCCCTTGCCATGTACGACCGCCTGATCCCGCAATGGCAAGCCCTGGGGCCGCCGGCGCAGGCCGACGTCGCACGCCTCCTGGCGGACAGCCTGCTGGCGCTCCATGCCCGCAACCGCATGCGGGACATCATCACCCGCTATGAAGCGATGCGCGCGGACGGCATCCCGGTGCCCGATTACGTCCTGGGGGACGTGGGCTCCGCCTACCTGGCGACGCGCCAGCCCGAGAAGGCCGCCACGCTGTTTCGCGCGTCCCTGGCGGCCGGAAAGCACGAGGGCCCCAGCCGATTGGCGGACGCCACCGGCCTGTTCTACGCATTGACCGAATCCGGACAATACGACGCGGCCGACGCCGAATTCGACAGCGTGGCGAACGCCTTGCCCGTGTGGATCTATCACAAGGGAGATCCCCGGCGCCGCCCCAATCCTCCAAAGCTGGATGCGGCGCAAACCCAGGCGCTCGGGCTTCTCGACGCGAGCCGGACCGTGCAGGCGCAGGCCGCCCTGGATGAAATGGTCGATGCCGCGCCCGACAACACCAGCATTCGCGCGGCCCGATCCGCCGTCTACCGCGCCCGGGATCTTCCCCGCCACGCGGAAAGAGACCTGAAGATCGCGGAAAGCCAAGCCCCCAGGTCCGCCGAAGTCGAGCTGAACCAGGCGGAGACTGCCCTCTCCCTGCAGGAATGGCATCAGGCAAAGCTGCTGCTGGACGACCTGAAGTCCCGGGCGCCGGACGATGGATCCGTGCAGCGACTGGCGCGGGAATGGGATGTGCACAACATGGCCGAGTGGCGGGTGACCGCCGGACGCGGCACATCCACCAGCAGCCCTGTTCTGGGCAGCCGCGACTGGAACATCGACACAGTGCTGTACTCGCCGCCCATCGATGAAAACTGGCGTGTGTTCGCCGGCGCCGGCTATTCCGAAGGGGTATTCGAAGAGGGCATCGGCCATTACAGCTGGACACGCGCAGGCGTCGAATGGCGCGGCCGCGACGTCACGGCACAGGCGGAAGTATCCGGCAACCGCTATGGCTATGGAACCAGGACTGGCGCGGCCGCTTCGGTCCTCGTGGATCTGGACGACCATTGGCAGATCGGCGCCGGCGCGGCCCTGCTGTCGCGAGACACGCCGCTGCGAGCCCTCACGCACGACGTCACCGCCAACAACGTGCAGGCGTCGCTGCGCTGGCGCGGCGACGAACGCCGCGAATGGACGCTGTCGGTGACGCCATCGTTCTTTTCGGACGGCAACAACAGGCTGGAAGTGGATCTGAACGGCCGCCAGCGCCTGTACACGGCTCCGACGATCAAGGTCGATGCGCTGCTGGATCTGTCCGCCTCGCACAACACCGGGGACGACACGGTCGACTACTTCAATCCGAAATCGGATCTGACGATCCTGCCCGCACTGCAGCTCACGCACACGCTGTATCAGCGCTACGAGACGCAATGGACGCAACAGTTCCTGCTCGGCGCGGGCAGCTATACGCAGCAGCGCCATGGCACGGGAGGCATCTTCACGGCCGGCTACGGCCAGCGCTACCGTTACAACGACGTCCTGGAGGTCGGCTTCATGATCACGGGCACCTCGCGGCTCTACGACGGCCAGCGGGAACGCGACTACAACCTCCTCGTCAACATGACGTACCGATTCTGA
PROTEIN sequence
Length: 752
LYPRLSPAVFTFCAILALPGIGLCASIQDYDTLLQSARAHRDAQQWNDAIRLFREGEQRFPQQNAFTYGHIMTLADAGRTDEAIQRGSELVSRKPGDADSHLVLEYAYQQARQPYAALEQASQAHDLAPNKAYVVRAYVLAQQRAQLPQAALRTAQDHPGILESSRIRSLQADVAAQLTRAATTESRGEASRFVLADQALAMYDRLIPQWQALGPPAQADVARLLADSLLALHARNRMRDIITRYEAMRADGIPVPDYVLGDVGSAYLATRQPEKAATLFRASLAAGKHEGPSRLADATGLFYALTESGQYDAADAEFDSVANALPVWIYHKGDPRRRPNPPKLDAAQTQALGLLDASRTVQAQAALDEMVDAAPDNTSIRAARSAVYRARDLPRHAERDLKIAESQAPRSAEVELNQAETALSLQEWHQAKLLLDDLKSRAPDDGSVQRLAREWDVHNMAEWRVTAGRGTSTSSPVLGSRDWNIDTVLYSPPIDENWRVFAGAGYSEGVFEEGIGHYSWTRAGVEWRGRDVTAQAEVSGNRYGYGTRTGAAASVLVDLDDHWQIGAGAALLSRDTPLRALTHDVTANNVQASLRWRGDERREWTLSVTPSFFSDGNNRLEVDLNGRQRLYTAPTIKVDALLDLSASHNTGDDTVDYFNPKSDLTILPALQLTHTLYQRYETQWTQQFLLGAGSYTQQRHGTGGIFTAGYGQRYRYNDVLEVGFMITGTSRLYDGQRERDYNLLVNMTYRF*