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scnpilot_solids1_trim150_scaffold_144_curated_34

Organism: solids_Castellaniella_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(37748..38122)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=beta proteobacterium L13 RepID=UPI00037AECCC similarity UNIREF
DB: UNIREF100
  • Identity: 41.0
  • Coverage: 105.0
  • Bit_score: 64
  • Evalue 8.90e-08
Curli production assembly/transport component CsgF {ECO:0000313|EMBL:CDM25911.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 128.0
  • Bit_score: 108
  • Evalue 9.90e-21
curli production assembly/transport component CsgF similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 122.0
  • Bit_score: 63
  • Evalue 6.30e-08

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGGATTCACATGTTCCCAGCACCCGCGCGAGCGCGCCGCGCCTCGGAGCCGCACTGGCGTCCCTGGCGGCGATCCCGCTCCTGTCCGCATCGGCGCAGGCCGGCCAGTTGCTCTACACCCCCGTGAACCCGTCGTTCGGCGGCAACCCGCTCAACGGCCCGACCCTGCTGCAAAGCGCACAGGCCCAGAAGCGCTACCCCTACCCCATGGACGACCTGGGGATCGACAACATCGGCCAGATCCTGCAGACCAACAACGGCTTCCTGATCCAGCGGGGCAGCAAGCTGTACTGGGTGGATCTCAACGGAAACGCACACCCCATCAATCTGGATGGGTCCAGCACGACCAGCACGGCCGACGCGCCGATCAAATAA
PROTEIN sequence
Length: 125
MDSHVPSTRASAPRLGAALASLAAIPLLSASAQAGQLLYTPVNPSFGGNPLNGPTLLQSAQAQKRYPYPMDDLGIDNIGQILQTNNGFLIQRGSKLYWVDLNGNAHPINLDGSSTTSTADAPIK*