ggKbase home page

scnpilot_solids1_trim150_scaffold_28178_curated_1

Organism: solids_Flavobacteriales_1

partial RP 13 / 55 BSCG 11 / 51 ASCG 2 / 38
Location: comp(2..973)

Top 3 Functional Annotations

Value Algorithm Source
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K4N4_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 320.0
  • Bit_score: 391
  • Evalue 8.30e-106
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:KDN56691.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 325.0
  • Bit_score: 408
  • Evalue 9.20e-111
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 46.1
  • Coverage: 323.0
  • Bit_score: 321
  • Evalue 3.30e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium sp. EM1321 → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 972
TCGTATATCGCCGGAAGCCGTGCTTATAACCTTACCGAAGTCTTGTCTCCTTATGAATACATTTACTGGCAACGGGAGCTGGACCCCTCGGCTTCCAGTAATAACAGCTTTAATTCCATGTACGGCCTGTGGGACGATATAGATATATATAAATCCAAAAGAGGAATAAACTGGCAGGACAGACTTTATGGCAACACCGGCCTTCAGCAGAATTATAACCTCGGCCTGTCCGGCGGAGACAAAGGCGGGTCGCTCACTTACAACCTGAACTATACGCATGACGATGAAACCTATATCATGCTTAACTCCACTTATAAAAGAGATTATGTAAGCGCCAGGATAAATAAAAAGATAAGCCGGAAGATTTCTTTTGAGCTTAACTCAAGAATGTCCAATACGGTAATCGACGGCCCCAGTATCTCTAACGGAAGAAAGCTAAGGGAAGCCGTGAAGTATGCGCCTGTAAGAAGCCTGGCTTCACTTACGGAAGGATCGCTGGGAGGCGCTGAAGACATTACCTCTGCGGAAGCGCTGAGCTCCCTGCAGGATCCGGTTCTTAATGTGGTTAATGAATACAAAGATCAGAATCGGTTTAACCTGACTTTTAATGCGGGGTTCAAGTGGAAGATTATTAACGGCCTCACCTTTGATACTAAGGGATCATATGCTTACAATAAGAATTTCACGGATAATATCTGGGTTAAAGGAACTGGTCAATCCAGTGCAAACGGAGGTCAGCCGGTTGCGAGGAGAGAGGATCAGAAAGGCTTTCTTTGGTCCATTCAGAATGTGCTGACCTATAATTTCAATTTGCAGGACAACCGGCACCGGTTTACTGTGGTGGCGGGGCAGGAAATGTCGAGCTCCCAGCGTAACGATATGCTGCTGGAGTCGAAGTTTTATCCGGAAGATTTTACCTATAAAGACGTGCTGGCTATGTGGAACTACGGAACTCCACAGCCAACGTATACC
PROTEIN sequence
Length: 324
SYIAGSRAYNLTEVLSPYEYIYWQRELDPSASSNNSFNSMYGLWDDIDIYKSKRGINWQDRLYGNTGLQQNYNLGLSGGDKGGSLTYNLNYTHDDETYIMLNSTYKRDYVSARINKKISRKISFELNSRMSNTVIDGPSISNGRKLREAVKYAPVRSLASLTEGSLGGAEDITSAEALSSLQDPVLNVVNEYKDQNRFNLTFNAGFKWKIINGLTFDTKGSYAYNKNFTDNIWVKGTGQSSANGGQPVARREDQKGFLWSIQNVLTYNFNLQDNRHRFTVVAGQEMSSSQRNDMLLESKFYPEDFTYKDVLAMWNYGTPQPTYT