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scnpilot_solids1_trim150_scaffold_19996_curated_2

Organism: solids_Flavobacteriales_1

partial RP 13 / 55 BSCG 11 / 51 ASCG 2 / 38
Location: 506..1087

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FKW0_FLAJ1 similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 193.0
  • Bit_score: 251
  • Evalue 6.10e-64
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 193.0
  • Bit_score: 251
  • Evalue 1.90e-64
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.7
  • Coverage: 193.0
  • Bit_score: 251
  • Evalue 8.60e-64

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Taxonomy

Flavobacterium johnsoniae → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 582
ATGAATAAAGTAAACGATCAACATTATATCGATTTGGTAATCGCGGGCGATACGAATGCATTTTCTACATTGTTAGACCGCTACAAAGACATGGTATTTACTTTATCTTTGAAAATGCTTCAGAATCGTGAAGAGGCTGAAGAAGCAGCGCAAGACACTTTTATAAAAATTTACAGATCGCTTGGCGGATTTAAGAGAGAGTCTAAATTCTCTACCTGGATATATCAAATAACTTATCATAATTGCCTCGACAGGCTGAGAAAGAAAAAAAGAAACAGCCTTCCCGTTGCCCTTGATGAATTTAAAGATTATGAAGCAAGTTCGCTAATGAATGTGTTGGATACAATTGAAAAAACAGAGCGGAAACAATTGATCATAAGTTGTTTGAATTTGCTGGCTCCTGAGGAAAACTTTTTATTGACACTTTATTATTTCGATGAAGCTTCTTTGAAAGAAATTTCTATAATTATGGGTATTAATGAAAACAATGTAAAAATAAAATTATTCAGAAGCAGGAAAAAACTGGCAGCAATTTTGAAAACCAAACTTGAACCGGAAATAATCAATCAATATGAAAAATAG
PROTEIN sequence
Length: 194
MNKVNDQHYIDLVIAGDTNAFSTLLDRYKDMVFTLSLKMLQNREEAEEAAQDTFIKIYRSLGGFKRESKFSTWIYQITYHNCLDRLRKKKRNSLPVALDEFKDYEASSLMNVLDTIEKTERKQLIISCLNLLAPEENFLLTLYYFDEASLKEISIIMGINENNVKIKLFRSRKKLAAILKTKLEPEIINQYEK*