ggKbase home page

scnpilot_solids1_trim150_scaffold_36612_curated_1

Organism: solids_Flavobacteriales_1

partial RP 13 / 55 BSCG 11 / 51 ASCG 2 / 38
Location: comp(31..1137)

Top 3 Functional Annotations

Value Algorithm Source
Polymorphic outer membrane protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFS6_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 41.6
  • Coverage: 358.0
  • Bit_score: 245
  • Evalue 8.40e-62
Hemagglutination activity domain-containing protein {ECO:0000313|EMBL:KDN55027.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.8
  • Coverage: 283.0
  • Bit_score: 264
  • Evalue 3.20e-67
polymorphic outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 358.0
  • Bit_score: 245
  • Evalue 2.60e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium sp. EM1321 → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1107
GGATCGTTAGCAGATGGCGACAGCTTTACCGGATCTTTAAGTCGCGAAGCAGGAGAGGATGCCGGCACGTATGCCATCACACAGGGCACGCTTGATATAACGGACAATTATGAGGTTACCTACATCGGAGCCAATCTGTCCGTTAACAGGAAGATCATTGCTGTAACCGCAGAGGCAAAAGAAAAGACTTATGGCGGGCCCGATCCTGTGATGACCTATACTTTTACTCCGGGGCTTATAGGAGACGACAGCTTTACCGGCATGCTTGAAAGGGCAGCAGGAGAGGGGGCGGGCTCGCATGCCATTAATCAGGGCACATTGGCTTTAAATGGCAACTATAAACTGGATTACACAGGCGCTCATCTCCTGATCCATAAGAAAGATATTTCCATCACTGCCTTACCTGCATCCAAAATATATGGAGAGGCTGATCCGGCTTTTACTTATACGTTTACCCCCTCGCTTATTGACGGAGACCATTTTTCGGGAACGCTTGGAAGAGAGGCCGGCAGGAATGTGGGAGAATATATGCTTACGATAGGTTCTTTGACGGCAGGCGATAATTATAATGTAACGGCATTTACTCCAGCCCGTCTTACCGTTACGCCGGCTCCGTTGGTAATCACTGCAGAAGATAAGACTAAAACCCAGGGGGCCGTGAATCCGGTTTTTACCTTTAAGTATGACGGGCTCGCCGGTGGAGATGCTCCCTCGGATCTTGCGAGCCTTCCACAGGGACAGACGGCTGCGGCTACCGGATCCCCAATCGGTTATTACGATATAACCGCCGGTGGCGCAGCTTCCCCGAATTATACGATTAATTATGTTGCCGGTAAATTGTCCATTTTACCCTCTGCCGGCAGCAACATTAAAGTATGGAGCAGCAGTGCAACCACCCTGCAAATAAGGGTATATGCCGAAACATCTCAACACTCGCATATCGTCCTGTATAACGTTTCCGGTCAGCCGGTTGTATCCATACAAAAGCAGCTTCAGGCAGGCATCAACAATCTTACAATGAGCGTAGGAAATGTAGCTCCGGGAATGTACGTCCTGAGTGTCAGAGCGGATAAATTCCGGGAAGCACAGCGAACCAAAATAAAATAA
PROTEIN sequence
Length: 369
GSLADGDSFTGSLSREAGEDAGTYAITQGTLDITDNYEVTYIGANLSVNRKIIAVTAEAKEKTYGGPDPVMTYTFTPGLIGDDSFTGMLERAAGEGAGSHAINQGTLALNGNYKLDYTGAHLLIHKKDISITALPASKIYGEADPAFTYTFTPSLIDGDHFSGTLGREAGRNVGEYMLTIGSLTAGDNYNVTAFTPARLTVTPAPLVITAEDKTKTQGAVNPVFTFKYDGLAGGDAPSDLASLPQGQTAAATGSPIGYYDITAGGAASPNYTINYVAGKLSILPSAGSNIKVWSSSATTLQIRVYAETSQHSHIVLYNVSGQPVVSIQKQLQAGINNLTMSVGNVAPGMYVLSVRADKFREAQRTKIK*