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scnpilot_solids1_trim150_scaffold_6433_curated_1

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: 1..1605

Top 3 Functional Annotations

Value Algorithm Source
msbA; lipid A export ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 526.0
  • Bit_score: 676
  • Evalue 6.70e-192
Lipid A export ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A621_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 65.2
  • Coverage: 526.0
  • Bit_score: 676
  • Evalue 2.10e-191
ABC transporter transmembrane region {ECO:0000313|EMBL:AHG90120.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 534.0
  • Bit_score: 716
  • Evalue 2.60e-203

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1605
ATTGACGGTGATCCCATGGGATCGCTGCGGAACATCATCTTCGTCATCCTCGGCGCCGTCTTCCTGAAGAGCATCTTTGTCTTCCTGGCCGGACAGACGGGAGCGAAGCTGCAGGAATACGTGACGCGCGACCTGCGTGATGCTGTCTACATGCACCTCACCCGGTTGCCGCTCGGATTCTTCACCCGCTTCAAGGCCGGTCAGATTCTCCAGCGCGTCCTGACGGATACCGCGCAGACCAAGCAGGTCATCACCGAGGTCATAACTCGCGCCTTGCAGAGCGGCGCGACTGTCATCGTCACGATCTACGCGCTGTTCGCGATCTCCTGGGAGCTCGCCCTGCTCTCCCTTGTCGTCGCACCACTGCTGACCGGCGCCCTGCAGCCGCTGCTCAGGCGGTTGCGTAGTGGACATAGGCGGCTCGGCAACCAGCACGGCGAGATGACGAGCGTGGTGCAGGAAACGGTGAGTGGCATCAGGCTTGTGAAGTCGTTCGGAGCCGAGGGCTACGAGGAGCGCCGCTTTATCGATGCCAGCGGGGACTATGCCCGCGGCACAGCGCGGATGGCACGGCTGGCGGTGCTCTCGCAGCCGATCACGGAGACCATCGGCACCGCGATTTCCGTCGCCATCCTCTGGTTCGGCGCTCGCGAGGTGCTCGTGGATGGCTCGCTCTCCGGTGCCGACCTGATCACCTTCCTCATCCTCGTGATGCGGATGCTGCAGCCCATGAAGCAGCTCTCCCAGCTACCCACGACTGCCCAGGCGTCGCTCGCCGCTGCCGAGCGGCTGTTCGAGATCCTCGACCATCCCACCGAGGCGGCGACGGATCGGGGCACCCGGAGCGTGAGCGGTTTCCACGATTCCATCACGTTCGACGGTGTGTCGTTCGCTTACGAAGACGAGCCGGTGCTGCGGGACATCAGCTTCACAGCGCGCCGCGGACAGATGATCGCTCTCGTCGGCGCCAGCGGCGCGGGCAAGACGACGCTGGTCGACCTCATCCCGCGCTTCTACGAACCCACCGCCGGGCGGATCCTGCTGGACGGCGTGGACACGCGCGACATCAGGCTGCCGGAACTGCGCTCCTTGATCGGCATCGTCAGTCAGGACACGGTGTTGTTCAACGACACGGTTCGTCACAACGTCGCCTATGGTTCCGAGGGTCGATTCACGACCGCGCAGATAGAGGCGGCGGCGCGGGCGGCCAATGCGGAGGGCTTCATCGCTGCTCTCCCACAGGGCTATGATACGCCGCTCGGTGAGCGCGGCACACGACTCTCCGGCGGTCAGCGCCAGCGACTGGCAATCGCGCGCGCTCTTCTCGTCGATCCGCCCGTGCTCATCCTGGACGAGGCCACGTCGGCGCTGGACACCGAGTCGGAGCGGCTGGTGCAGGAGGCCATAGATCGGTTGCTGGAGGGGCGCACGGTGTTTGTGATCGCCCATCGCCTGTCGACGGTCGTCCACGCGGACCAGATTCTGGTGCTCGACCATGGTCGGCTGGTGGAGCACGGAACGCACGATGAATTGCTGACGCGCGGCGGAGCCTACCGTCGACTGCATGACATCCAGTTCGGTGCGCTGGAAGAGCAGCGAAGCTAG
PROTEIN sequence
Length: 535
IDGDPMGSLRNIIFVILGAVFLKSIFVFLAGQTGAKLQEYVTRDLRDAVYMHLTRLPLGFFTRFKAGQILQRVLTDTAQTKQVITEVITRALQSGATVIVTIYALFAISWELALLSLVVAPLLTGALQPLLRRLRSGHRRLGNQHGEMTSVVQETVSGIRLVKSFGAEGYEERRFIDASGDYARGTARMARLAVLSQPITETIGTAISVAILWFGAREVLVDGSLSGADLITFLILVMRMLQPMKQLSQLPTTAQASLAAAERLFEILDHPTEAATDRGTRSVSGFHDSITFDGVSFAYEDEPVLRDISFTARRGQMIALVGASGAGKTTLVDLIPRFYEPTAGRILLDGVDTRDIRLPELRSLIGIVSQDTVLFNDTVRHNVAYGSEGRFTTAQIEAAARAANAEGFIAALPQGYDTPLGERGTRLSGGQRQRLAIARALLVDPPVLILDEATSALDTESERLVQEAIDRLLEGRTVFVIAHRLSTVVHADQILVLDHGRLVEHGTHDELLTRGGAYRRLHDIQFGALEEQRS*