ggKbase home page

scnpilot_solids1_trim150_scaffold_2368_curated_2

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: 634..3687

Top 3 Functional Annotations

Value Algorithm Source
Putative outer membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABW6_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 53.0
  • Coverage: 999.99
  • Bit_score: 1045
  • Evalue 0.0
TonB-dependent outer membrane protein, SusC/RagA {ECO:0000313|EMBL:AHG93613.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 999.99
  • Bit_score: 1206
  • Evalue 0.0
putative outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 999.99
  • Bit_score: 1045
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 3054
ATGCAGATGTGTCGTGTATTCTGGTGCGCCGCCACGCTCGCCGGCGCCCTGGCGTTCGGGCCAGTATTGGCGCGCCCAGCCGGAGCTCAGGCGGTCGGGTCCGTAGGCGGTACCGTCACGGACTCGGTGTCCGGCGCCGGACTGGCCGGCGTGCAGGTGACGCTCGTAGGTAGTACGCGGGGCGGCATGACCGACGCCAACGGCGTCTACCTGGTGCGCAACGTACCGCCGGGGAATGTCATTGTACGTGTCCAGCGACTCGGCTTCGCGGCCGGCCAACGCGAGGTGACCGTCGCGCCTGGTGCGACGGCAAGGGCGGACTTCGCGCTCAGCCCGGTAGCCACCGTTCTCTCGGCGGTGGTATCGGTGGGCTATGGCAGCAGCCGACGCGAGGACGTGACCAGCGCCATCGCATCTGTCAGCGCGGCGGATATCGCCGGCTCGCCGTCGGCCGGACTGGACGCCGCTCTCCAGGGAAAGGCACCTGGGGTGCAGGTGCTCCAGAACGCCGGTAACCCTGGCAACGGCATATCCATCCGCGTCCGCGGTCCGGCTTCCATCAACGCCGGCAATCAGCCGCTCTACGTCGTGGACGGTGTCCCGATACTCCAGGAGAACTACTCCCAGCTCGGGCTGGGCGGCCAGGACGTCACCGCGGTCACCGGCATCAATCCGGATGACATAGAGACGATAGATGTGCTCAAGGACGCGGCCGCCGCGTCGATCTACGGCTCGCGGGGCTCCAACGGCGTCGTCCTCATCACCACCAGGCGCGGCGCGTCCGGGAGTTCGCGCATCGCCTTCAACGCCTACACGGGTACACAGCGGGCGCCGTCACCGATCGGGCTGCTCAACGCCCAGCAGTACGTGCAGCTCTACAACGAGAGCGCGAAGAACGACGATTATGACGAGGAGGACTGGCCATTCGTCGCGGGCAAGGACGACGCCAGAAGCTACGACTGGCAGGGGGCCGTATTCCGCCAGGCCCCGATCAGCGACGTCCAGCTCAGCGCGAGCGGCGGCGGTGACCGCGTGCAGTACTTCCTCTCGGGCTCGTACTTCGACCAGCAGGGAGTCGTCATCGGTTCCGGCTACGACCGCAGTTCCGCCCGCCTGAACCTGGACTTCGCCGCCAACGACCGGCTGTCGCTGCGCACCTCCATCGCGGCGTCGAAGGAGAACAATCAGCGCATCGAGGGCGACGGGAGCCTGGACGGCATCGTCACCAATGCGATCGGCATGCAGCCCATGCGTCCCATCTACCGGGATGATGGATCATTCGCGGGTCGCAAGGAGGGCCTCCGCTACTCCAATCCGACAGCACTGGCAAAGCTGAACAGCACGACGCTCTCCACGCAACGCATGCTGGGGAATGTCGAGGCCGAGTACAGCTTCACCGATAGAGTGCGTCTCACCGGCCGCGCCGGTGCCGACATCCTCAGCCTGGACGAATCGCAGTGGCAGTCGCCGCTCGTGGATCGCACCTACGCCCAGAGCGCGAGCGGCGTCGGCAAGGTTGGACATACAGGCGCCAACAAGTACCTCCTGGAGAGCTTTCTTTCCTATGACGCCCTGCGTTCCGAGCGCTCCACGCTGTCCATAGTCGCCGGAGCGAGCACGGAGCGAAATGACAGTGAACTGAGCTTCGTGCGCGGCGAGGGCTTCACGAGTGGCTTCACGAAGTACGTGCGAAATGCTGCCAACGTCACCTCCTACGACGGCAGTGCGACGGAGCACAACCTCGTCTCCTTCTTCTCGCGCGCGAACATGTCGTACGACAACCGCTACCTGTTCTCGCTGAGCGCACGCTCCGATGGATCGTCGCGATTTGGTGAGGACAACCGGTACGGTGTCTTCCCGGCAGCATCGATCGGCTGGAACGTGAGCAACGAATCGTTCGCCGAGGGCCTGTCGCGGCTGGGGACGTTGAAGTTGCGCGTCAGCTATGGACTTACTGGCAACGAGGGGATCGGAGACTTCGCCGCCCTCGGCCTGGCCGCCGGCGCGCCCTACGCGGGAACCCCGGGCATTGCCGCTACCACCTTTGCCAACCCGGATCTTCGCTGGGAGACGACCCGGGAGCTGGACACGGGGCTGGATCTGTCACTGTTCGGCGGCCGGGCGACGATCATGGCTGACTACTACGACCGGCAAACCGAGGACCTGCTGGTACGGCGCCCCATACCCATGACGAGCGGCTTCAGCTCCATCTGGGACAACATCGGCACCATCCGGAATCGAGGCGTGGACCTGGGGCTGAACACCGTCAACATCAACCCGGCCAGCGACAACGGCTTCAGATGGTCGAGCGACCTCAATGTCACGTTCAACCGCAACAAGGTCGAGAGCCTCTACCACGACCAGCAGTTCGTGAGCGGGATCAATGGTCGTGAGACCAGCCTGGTCACAGTCGGTCAACCGATTGGCGTCTTCTACATGTACAGGTTCGACGGCGTCGACCCGGCCACTGGTGACGCGATAATACATGACGTGGATGGCGACGGCGACATCACGTCCGCGGACCGCACCGTGGTCGGCAGCCCACATCCGGACTACTTCGGCGGCTTCACCAACACCTTCAGCCTCGGAGTCCTCGAACTGCGCACCTTCCTCGACTTCAGTCAGGGTAACGACGTCTTCAACATGATGCGCATCTTCACCGACGACGGCGGCTGTACGTGGGACAACCTGACCACGCTGGTCCTGAACAGATGGCAGAAACCTGGCGACATCACTGATGTGCCGCGCATGAGCTACGACTGCACGTCGGGAGCCGACCTCATAAGCAGCCGGTTCATCGAGGATGGCTCCTACGTGCGTCTGGGTGAGGTGACCCTCGGCCTGCGCCTTCCAGCAAGCTGGGCGGCGAGGGCCGGCATGGAGAGCGCGCGTGTCTATATCTCCGGCCGCAACCTGAAAACGTGGACCGACTACAGCGGCTATAACCCGGCAGTAAACAGCGCCGGTTCGGACGCGAACATGGTGATGGGCACCGACTACTACGCCTATCCGCTCGCCCGCACCTTCACCTTCGGCATAAGCGCCGGCTGGTGA
PROTEIN sequence
Length: 1018
MQMCRVFWCAATLAGALAFGPVLARPAGAQAVGSVGGTVTDSVSGAGLAGVQVTLVGSTRGGMTDANGVYLVRNVPPGNVIVRVQRLGFAAGQREVTVAPGATARADFALSPVATVLSAVVSVGYGSSRREDVTSAIASVSAADIAGSPSAGLDAALQGKAPGVQVLQNAGNPGNGISIRVRGPASINAGNQPLYVVDGVPILQENYSQLGLGGQDVTAVTGINPDDIETIDVLKDAAAASIYGSRGSNGVVLITTRRGASGSSRIAFNAYTGTQRAPSPIGLLNAQQYVQLYNESAKNDDYDEEDWPFVAGKDDARSYDWQGAVFRQAPISDVQLSASGGGDRVQYFLSGSYFDQQGVVIGSGYDRSSARLNLDFAANDRLSLRTSIAASKENNQRIEGDGSLDGIVTNAIGMQPMRPIYRDDGSFAGRKEGLRYSNPTALAKLNSTTLSTQRMLGNVEAEYSFTDRVRLTGRAGADILSLDESQWQSPLVDRTYAQSASGVGKVGHTGANKYLLESFLSYDALRSERSTLSIVAGASTERNDSELSFVRGEGFTSGFTKYVRNAANVTSYDGSATEHNLVSFFSRANMSYDNRYLFSLSARSDGSSRFGEDNRYGVFPAASIGWNVSNESFAEGLSRLGTLKLRVSYGLTGNEGIGDFAALGLAAGAPYAGTPGIAATTFANPDLRWETTRELDTGLDLSLFGGRATIMADYYDRQTEDLLVRRPIPMTSGFSSIWDNIGTIRNRGVDLGLNTVNINPASDNGFRWSSDLNVTFNRNKVESLYHDQQFVSGINGRETSLVTVGQPIGVFYMYRFDGVDPATGDAIIHDVDGDGDITSADRTVVGSPHPDYFGGFTNTFSLGVLELRTFLDFSQGNDVFNMMRIFTDDGGCTWDNLTTLVLNRWQKPGDITDVPRMSYDCTSGADLISSRFIEDGSYVRLGEVTLGLRLPASWAARAGMESARVYISGRNLKTWTDYSGYNPAVNSAGSDANMVMGTDYYAYPLARTFTFGISAGW*