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scnpilot_solids1_trim150_scaffold_15018_curated_2

Organism: solids_Thiobacillus_2

partial RP 40 / 55 MC: 1 BSCG 39 / 51 MC: 2 ASCG 4 / 38
Location: comp(1418..2746)

Top 3 Functional Annotations

Value Algorithm Source
NusA antitermination factor; K02600 N utilization substance protein A id=12495470 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 447.0
  • Bit_score: 759
  • Evalue 1.60e-216
NusA antitermination factor; K02600 N utilization substance protein A similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 447.0
  • Bit_score: 727
  • Evalue 3.60e-207
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 447.0
  • Bit_score: 727
  • Evalue 1.60e-206

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1329
ATGAGCCGTGAAATGTTGATGCTGGCCGATGCGCTGGCACGCGAAAAGAACGTGAGCCAGGAGGTGGTGTTCGAGGCCCTGGAGCAGGCACTCGCCTCCGCCACCAAAAAACGCTTCAAGGAAGAGTCCGATGTGCGCGTATCGATCGACCACGCGACCGGTGACTATGAATCCTTCCGTCGCTGGCAGGTCGTGACCGAAGCCGACCTGGAGTCCGAGGGCTATCAGATCCTGCTGATCGATGCCCAGGACAAGATCCCCGACATCGAAATCGGCGACTACATCGAAGAACCGCTGGAAAACATCGAATTCGGCCGCATCGGTGCCCAGGCCGCCAAACAGGTCATCCTGCAAAAGATCCGCGACGCCGAGCGCGAGCAGATCATCAGCGACTTCCTTGCCCGCAAGGAACACCTCGTCAACGGCGTGGTGAAGCGGATCGATCGCGGCAATGCCATCATCGAATCCGGCCGCGTCGAAGGCTTTCTGCACCGCGACCAGATGATCCCGCGCGAAAACCTGCGCGTCGGCGACCGCGTGCGTGCCTACCTGCTGCGCATCGATCGGGGGGTCCGCGGTCCGCAGGTCGTGCTGTCGCGCACCGCATCCGAGTTCATCATGAAGCTGTTCGAGCTGGAAGTGCCTGAAATCGAAGAAGGCCTGCTCGAGATCAAGGCGGCCGCCCGCGACCCCGGCCTGCGCGCCAAGATTGCGGTGGTCTCGCACGACCCGCGCATCGATCCGATCGGCACCTGCATCGGTCTGCGCGGCTCGCGCGTCACCTCGGTGACCAACGAACTGGCCGGCGAACGCGTCGACATCATCCACTGGTCGGCCGACCCCGCCCAATACGTCATCAACGCGCTGGCGCCCGCCGAGGTCAGCTCCATCGTGGTGGATGAGGACAAGCACAGCATGGACGTGGTGGTGGACGAGGAACAACTGGCGATGGCGATCGGCCGCGGCGGCCAGAACGTCCGCCTGGCATCCGAGCTGACCGGCTGGGAACTCAACATCATGTCGCGCGAAGCGGCGGATGAAAAACACTCGGCCGAAAGCGGCAAGACGCTCGCGCTCTTCATCGAGAAGCTCGACGTGGACGAGGAGGTCGCCCAGATCCTGGTCGACGAAGGCTTCTCCACGCTGGAAGAAGTCGCCTACGTCCCGCTGAACGAAATGCNNNNNNNNCTCGCCAGCAAGGGCGTCCACACCACCGAGGATCTGGCCGAGCTGGCCGTCGATGAGCTGACCGAAATGGCGGCCATGGATGCCGAACGCGCCAAACAATTGATCATGGCCGCACGCGCGCCCTGGTTCGCCCAAGGCTAA
PROTEIN sequence
Length: 443
MSREMLMLADALAREKNVSQEVVFEALEQALASATKKRFKEESDVRVSIDHATGDYESFRRWQVVTEADLESEGYQILLIDAQDKIPDIEIGDYIEEPLENIEFGRIGAQAAKQVILQKIRDAEREQIISDFLARKEHLVNGVVKRIDRGNAIIESGRVEGFLHRDQMIPRENLRVGDRVRAYLLRIDRGVRGPQVVLSRTASEFIMKLFELEVPEIEEGLLEIKAAARDPGLRAKIAVVSHDPRIDPIGTCIGLRGSRVTSVTNELAGERVDIIHWSADPAQYVINALAPAEVSSIVVDEDKHSMDVVVDEEQLAMAIGRGGQNVRLASELTGWELNIMSREAADEKHSAESGKTLALFIEKLDVDEEVAQILVDEGFSTLEEVAYVPLNEMXXXLASKGVHTTEDLAELAVDELTEMAAMDAERAKQLIMAARAPWFAQG*