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scnpilot_solids1_trim150_scaffold_14668_curated_2

Organism: solids_Lysobacter_1

partial RP 26 / 55 MC: 1 BSCG 26 / 51 ASCG 2 / 38
Location: comp(516..1547)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylate synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA-uridine isomerase D {ECO:0000256|HAMAP-Rule:MF_01082}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 341.0
  • Bit_score: 488
  • Evalue 5.70e-135
truD; tRNA pseudouridine synthase d (tRNA-uridine isomerase d)(tRNA pseudouridylate synthase d) protein (EC:5.4.99.-); K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 344.0
  • Bit_score: 462
  • Evalue 9.80e-128
tRNA pseudouridine synthase D n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZCE2_XANCT similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 343.0
  • Bit_score: 474
  • Evalue 1.00e-130

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Taxonomy

Lysobacter sp. A03 → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1032
GTGACGGCGGCTGCGCGCGCCCACGGCGCGCCGGTGCTGGCCGCGCGCATCCGCAGCAGCGCGGAAGATTTCTTCGTCGAGGAATTGCCGGGCTTCGAGGCCAGCGGCGCCGGCGAGCACCTGCTGCTGACCATCGAGAAGCGCGGAATGAACACCGCCTTCGCCGCCAGGACCATCGCGCAATGGGCGGGCGTGGATGAATCGGCGATCGGCTACGCCGGGCTGAAGGACCGCCATGCGGTGACCCGCCAGCGCTTCAGCGTATGGCTGCCCAAGAAGGTCGCGCCGGCCATCGATGCGCTGAGGTCGGATGAGCTGCAGGTGCTGGAACACGCATGGCACGCGCGCAAGCTGCCGCGCGGCGCGCTGGCTGGCAACCGCTTCGTGCTGGTGCTGCGCGAAGTCGAGGGCGAGCGCGGGGCCATCGATGCACGGCTGTCCGCGATCGCACGGCGCGGCGTGCCCAACCACTTCGGCGAACAGCGCTTCGGCCGGGGAGGTGACAGCGTGCGCAAGGCGGTGGCGATGTTCGCCGGCGGCCGGGTCAAGCGCGAGGAGCGCACGATGCTGCTGTCCGCCGCGCGTTCGGACCTGTTCAACCGGGTGCTGGCAGCGCGGGTCGAGGCGGGCAACTGGGACGCCGCGCTGGACGGCGAGGTGTGGATGCTGGACGGCAGCCGCAGCGTGTTCGGCCCCGAGCCGTTCACACCGGAACTGCAGGCGAGGCTGGAGGCATTCGACATCCATCCCAGCGGCCCGCTCTGGGGCGAGGGCGAACTGCGCAGCACCGGCGCTGCCCGCGAACTGGAGCTGGCGGCGCTGGCCGGCGATACCGCCTCGCGCCTGCGTGCGGGACTGGAGCGCGCGGGCCTGAAGCAGGAGCGCCGCGCGCTGCGGCTGCGGCCGATGGAACTGGCGTGGACGTGGCGCGAGGACGGCGCGCTGGAGCTGCGCTTCGCGCTGCCGCCGGGGTGCTATGCGACGACGGTGCTGTCCGAGCTGGGCGATATCGTGGACGCTGCAGCGCAATGA
PROTEIN sequence
Length: 344
VTAAARAHGAPVLAARIRSSAEDFFVEELPGFEASGAGEHLLLTIEKRGMNTAFAARTIAQWAGVDESAIGYAGLKDRHAVTRQRFSVWLPKKVAPAIDALRSDELQVLEHAWHARKLPRGALAGNRFVLVLREVEGERGAIDARLSAIARRGVPNHFGEQRFGRGGDSVRKAVAMFAGGRVKREERTMLLSAARSDLFNRVLAARVEAGNWDAALDGEVWMLDGSRSVFGPEPFTPELQARLEAFDIHPSGPLWGEGELRSTGAARELELAALAGDTASRLRAGLERAGLKQERRALRLRPMELAWTWREDGALELRFALPPGCYATTVLSELGDIVDAAAQ*