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scnpilot_solids1_trim150_scaffold_22892_curated_2

Organism: solids_Lysobacter_1

partial RP 26 / 55 MC: 1 BSCG 26 / 51 ASCG 2 / 38
Location: 1103..1597

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase rhlB; K03732 ATP-dependent RNA helicase RhlB [EC:3.6.4.13] similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 165.0
  • Bit_score: 307
  • Evalue 3.30e-81
ATP-dependent RNA helicase RhlB {ECO:0000256|HAMAP-Rule:MF_00661, ECO:0000256|SAAS:SAAS00011806}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00661, ECO:0000256|SAAS:SAAS00011808};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 165.0
  • Bit_score: 307
  • Evalue 8.60e-81
ATP-dependent RNA helicase RhlB (Fragment) n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TRU4_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 165.0
  • Bit_score: 307
  • Evalue 1.00e-80

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 495
GTGTCCGACAAGCCCCTGACCGACATCACCTTTTCCACCTTCGACCTGCATCCGGACCTGTTGGCCGGGCTGGAAGGCGCCGGCTTCACCCGCTGCACCCCCATCCAGGCGATGACCCTGCCGGTGGCGCTGCCCGGCGGCGACGTCGCCGGCCAGGCCCAGACCGGCACCGGCAAGACCCTGGCCTTCCTGGTGGCGGTCATCAACCGCCTGCTGACCCGCCCGGCGCTGGCCGACCGCAAGCCGGAGGACCCGCGCGCGCTGATCCTGGCGCCGACCCGCGAGCTGGCCATCCAGATCCACAAGGACGCGGTGAAGTTCGCCTCCGACCTTGGCCTGAAGTTCGCGCTGGTGTACGGCGGCGTGGACTACGACAAGCAGCGCGAGCTGCTGCAGGCCGGCGCCGACGTGATCATCGCCACCCCCGGCCGGCTGATCGACTACGTCAAGCAGCACAAGGTGGTCAGCCTGCACGCCTGCGAGGTCAGCGTGCTG
PROTEIN sequence
Length: 165
VSDKPLTDITFSTFDLHPDLLAGLEGAGFTRCTPIQAMTLPVALPGGDVAGQAQTGTGKTLAFLVAVINRLLTRPALADRKPEDPRALILAPTRELAIQIHKDAVKFASDLGLKFALVYGGVDYDKQRELLQAGADVIIATPGRLIDYVKQHKVVSLHACEVSVL