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scnpilot_solids1_trim150_scaffold_6443_curated_4

Organism: solids_Lysobacter_1

partial RP 26 / 55 MC: 1 BSCG 26 / 51 ASCG 2 / 38
Location: 3354..3881

Top 3 Functional Annotations

Value Algorithm Source
ABC-type spermidine/putrescine transport system n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GQF3_THISH similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 155.0
  • Bit_score: 173
  • Evalue 2.50e-40
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:KGO99298.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 175.0
  • Bit_score: 274
  • Evalue 8.60e-71
spermidine/putrescine ABC transporter; K11075 putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 155.0
  • Bit_score: 173
  • Evalue 7.90e-41

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Taxonomy

Lysobacter defluvii → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGAGCAGCGCCCCCAACGGCACGTGGACGCAGCTGTGGGCGGAGGTCGTGCGCAACCTGTTCGGCTGGTTCCGTGCGGTCGGCACCGAGTTCCGCACCCGCCGCGGGCGCTTCCTCGTCACCATGCTGCCGATGCTGTGGCTGCTGCTGTTCTTCGCGGTGCCGTTCCTGATCGTGCTGAAGATCAGTTTCGCCGAGGCCGTGTTCGGGCAGTCGCCGCCGTACACGCCACTGGTGGAGCAGGCCGCCGATGGCGCCACCAGCCTGCGCCTGCACGCCGGCAGCTACGCGCTGCTGCTGCAGGACCCGCTGTACGTCGCCGCCTACCTGAAGTCGCTGCTGTTCGCCGGCGTGTCCACCCTGTTCTGCCTGCTGCTGGGCTACCCCATCGCCTACGGCATCGCCCGCGCGCGGCCAACATGGCGGATGCTGCTGCTGGTGCTGGTGATCCTGCCGTTCTGGACCAGCTCGCTGCTGCGCACCTACGCGATGATCGGCATGCTCAAGGCCAATGGCGTGCTGACCGGC
PROTEIN sequence
Length: 176
MSSAPNGTWTQLWAEVVRNLFGWFRAVGTEFRTRRGRFLVTMLPMLWLLLFFAVPFLIVLKISFAEAVFGQSPPYTPLVEQAADGATSLRLHAGSYALLLQDPLYVAAYLKSLLFAGVSTLFCLLLGYPIAYGIARARPTWRMLLLVLVILPFWTSSLLRTYAMIGMLKANGVLTG