ggKbase | organisms

Consensus taxonomy: Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Metagenomic Context

Parent: SCNPILOT_SOLID_1_TRIM150_UNK Manually curated genome
Original version: SCNPILOT_SOLID_1_TRIM150_Micrococcales_69_5

Properties

Avg. coverage: 1.00 Longest contig: 8.49 Kbp Bin length: 1.84 Mbp GC content: 68.98 %

Contigs count: 1001 Features count: 2511 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 24 / 55 BSCG 24 / 51 MC: 2 ASCG 8 / 38

Displaying items 1-50 of 1001 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
scnpilot_solids1_trim150_scaffold_31715_curated Genus: Microbacterium (66.67%)	3	1224 bp	71.00	1.00	104.41
scnpilot_solids1_trim150_scaffold_30636_curated Species: Microbacterium sp. SA39 (100%)	2	1757 bp	69.21	1.00	103.30
scnpilot_solids1_trim150_scaffold_13238_curated Species: Microbacterium mangrovi (75%)	4	2314 bp	72.26	1.00	102.94
scnpilot_solids1_trim150_scaffold_32187_curated Species: Microbacterium mangrovi (50%)	2	1248 bp	70.27	1.00	102.40
scnpilot_solids1_trim150_scaffold_20238_curated Genus: Microbacterium (100%)	4	2174 bp	72.49	1.00	102.12
scnpilot_solids1_trim150_scaffold_22514_curated Species: Intrasporangium chromatireducens (50%)	2	1516 bp	68.67	1.00	101.72
scnpilot_solids1_trim150_scaffold_26881_curated Genus: Microbacterium (100%)	3	1419 bp	70.19	1.00	101.48
scnpilot_solids1_trim150_scaffold_38141_curated Species: Arthrobacter chlorophenolicus (100%)	2	1102 bp	70.51	1.00	101.27
scnpilot_solids1_trim150_scaffold_18449_curated Genus: Microbacterium (100%)	3	1795 bp	70.31	1.00	101.11
scnpilot_solids1_trim150_scaffold_26863_curated Species: Curtobacterium flaccumfaciens (50%)	2	1424 bp	69.38	1.00	100.70
scnpilot_solids1_trim150_scaffold_43493_curated Species: Arthrobacter phenanthrenivorans (50%)	2	1001 bp	66.73	1.00	100.70
scnpilot_solids1_trim150_scaffold_35374_curated Order: Micrococcales (66.67%)	3	1165 bp	71.07	1.00	100.69
scnpilot_solids1_trim150_scaffold_31650_curated Species: Arthrobacter phenanthrenivorans (100%)	3	1264 bp	67.72	1.00	100.63
scnpilot_solids1_trim150_scaffold_40266_curated Species: Microbacterium sp. TS-1 (66.67%)	3	1020 bp	69.22	1.00	100.59
scnpilot_solids1_trim150_scaffold_30481_curated Species: Arthrobacter sp. FB24 (100%)	3	1265 bp	67.19	1.00	100.55
scnpilot_solids1_trim150_scaffold_34633_curated Species: Arthrobacter phenanthrenivorans (100%)	2	940 bp	70.96	1.00	100.53
scnpilot_solids1_trim150_scaffold_17646_curated Genus: Microbacterium (100%)	3	1918 bp	68.87	1.00	100.42
scnpilot_solids1_trim150_scaffold_16906_curated Species: Leifsonia xyli (50%)	2	1921 bp	67.41	1.00	100.42
scnpilot_solids1_trim150_scaffold_20952_curated Genus: Microbacterium (100%)	3	1700 bp	71.59	1.00	100.41
scnpilot_solids1_trim150_scaffold_43645_curated Species: Microbacterium sp. CH12i (50%)	2	998 bp	68.14	1.00	100.40
scnpilot_solids1_trim150_scaffold_24916_curated Species: Arthrobacter phenanthrenivorans (100%)	3	1503 bp	69.13	1.00	100.40
scnpilot_solids1_trim150_scaffold_13113_curated Species: Beutenbergia cavernae (75%)	4	2334 bp	68.47	1.00	100.39
scnpilot_solids1_trim150_scaffold_40442_curated Species: Microbacterium oleivorans (50%)	2	1055 bp	70.90	1.00	100.38
scnpilot_solids1_trim150_scaffold_38011_curated Species: Microbacterium mangrovi (50%)	2	1076 bp	71.10	1.00	100.37
scnpilot_solids1_trim150_scaffold_17099_curated Genus: Microbacterium (100%)	3	1901 bp	71.80	1.00	100.37
scnpilot_solids1_trim150_scaffold_32374_curated Species: Arthrobacter crystallopoietes (50%)	2	1136 bp	72.98	1.00	100.35
scnpilot_solids1_trim150_scaffold_8751_curated Species: Microbacterium testaceum (75%)	4	3181 bp	70.42	1.00	100.35
scnpilot_solids1_trim150_scaffold_30555_curated Species: Microbacterium sp. C448 (50%)	2	1298 bp	69.72	1.00	100.31
scnpilot_solids1_trim150_scaffold_12720_curated Species: Microbacterium laevaniformans (50%)	2	2426 bp	68.18	1.00	100.29
scnpilot_solids1_trim150_scaffold_29015_curated Species: Microbacterium sp. oral taxon 186 (50%)	2	1059 bp	68.84	1.00	100.28
scnpilot_solids1_trim150_scaffold_24620_curated Species: Arthrobacter phenanthrenivorans (100%)	2	1454 bp	69.94	1.00	100.28
scnpilot_solids1_trim150_scaffold_13644_curated Order: Micrococcales (66.67%)	3	2265 bp	69.71	1.00	100.27
scnpilot_solids1_trim150_scaffold_24728_curated Species: Microbacterium sp. C448 (50%)	2	1511 bp	72.27	1.00	100.27
scnpilot_solids1_trim150_scaffold_35948_curated Species: Kocuria rhizophila (50%)	2	1152 bp	69.88	1.00	100.26
scnpilot_solids1_trim150_scaffold_33478_curated Species: Leifsonia aquatica (50%)	2	1170 bp	68.12	1.00	100.26
scnpilot_solids1_trim150_scaffold_31373_curated Species: Arthrobacter sp. PAMC25486 (50%)	2	1194 bp	70.94	1.00	100.25
scnpilot_solids1_trim150_scaffold_28459_curated Species: Arthrobacter phenanthrenivorans (66.67%)	3	1212 bp	67.57	1.00	100.25
scnpilot_solids1_trim150_scaffold_33418_curated Species: Curtobacterium flaccumfaciens (50%)	2	1215 bp	70.37	1.00	100.25
scnpilot_solids1_trim150_scaffold_6939_curated Genus: Microbacterium (100%)	3	3295 bp	72.84	1.00	100.24
scnpilot_solids1_trim150_scaffold_27837_curated Species: Microbacterium azadirachtae (50%)	2	1248 bp	71.96	1.00	100.24
scnpilot_solids1_trim150_scaffold_27470_curated Species: Microbacterium ginsengisoli (50%)	2	1305 bp	69.04	1.00	100.23
scnpilot_solids1_trim150_scaffold_29445_curated Genus: Microbacterium (75%)	4	1332 bp	70.50	1.00	100.23
scnpilot_solids1_trim150_scaffold_19584_curated Species: Microbacterium mangrovi (50%)	2	1784 bp	72.31	1.00	100.22
scnpilot_solids1_trim150_scaffold_34479_curated Species: Propionibacterium sp. KPL1844 (50%)	2	955 bp	73.09	1.00	100.21
scnpilot_solids1_trim150_scaffold_21556_curated Species: Microbacterium mangrovi (100%)	2	1452 bp	68.94	1.00	100.21
scnpilot_solids1_trim150_scaffold_25578_curated Species: Microbacterium mangrovi (100%)	2	1476 bp	72.15	1.00	100.20
scnpilot_solids1_trim150_scaffold_25271_curated Species: Microbacterium mangrovi (50%)	2	1488 bp	71.77	1.00	100.20
scnpilot_solids1_trim150_scaffold_42955_curated Species: Microbacterium mangrovi (50%)	2	1009 bp	71.66	1.00	100.20
scnpilot_solids1_trim150_scaffold_42278_curated Species: Intrasporangium chromatireducens (50%)	2	1030 bp	69.71	1.00	100.19
scnpilot_solids1_trim150_scaffold_41001_curated Species: Microbacterium sp. CH12i (50%)	2	1045 bp	69.95	1.00	100.19

Displaying items 1-50 of 1001 in total

solids_Micrococcales_1

SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

solids_Micrococcales_1

SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Processing

Terms of Service

Search Help