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scnpilot_solids1_trim150_scaffold_1804_curated_8

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(8705..9715)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 305.0
  • Bit_score: 404
  • Evalue 3.10e-110
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 305.0
  • Bit_score: 404
  • Evalue 1.40e-109
tRNA pseudouridine synthase B n=1 Tax=Rhodanobacter denitrificans RepID=I4WLT4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 305.0
  • Bit_score: 404
  • Evalue 9.80e-110

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGGTAGCGCGGACTAAGGTGCATGCCAGGTCGCGTACGCCGCGTGGCGCATGGCGCGACGTACACGGGATCGTCCTGCTGGACAAGCCGGTCGGCCTGAGTTCGAACCGGGCCTTGCAGGCGGTGCGCCGGCTGTTCGGGGCACGCAAGGGTGGGCACACAGGCACCCTCGATCCCATGGCCAGCGGGCTGCTGCCGCTGTGCTTTGGCGAGGCCACGAAGCTGGCTGGAGGCCTGCTTGGCTCGCGCAAGGCCTATGTGGCCGAGTGCCAGCTTGGAGTGACCACCGATACCGACGATGCCGCAGGCGAGATCGTCGGGCGGCGTCCGGTCCCTGCACTGGAGGCCGCAGCACTGGAAGTGCTGCTCGACCGCTTCCGTGGTCGGATCATGCAGGCACCACCGATGTACTCGGCCTTGCACCAGGCGGGCGAGCGGCTGTATGCGAAGGCGCGGCGGGGGGAGAAGATCGCCGTTCCCGCACGGGAGGTCGAGATCCACCGACTCGTGGTGCTGGGGCGTACGCCAGACACCCTGACCCTGGAAGTCGAATGCGGCACCGGTACCTACATCCGCTCCTTGGCCCGCGACCTGGGCGAGGCCCTGGGCTGCGGCGCCCATGTCTCGGCCTTGCGGCGGACCTGGGTGGCACCGTTCCGGGAGCCGCGGATGGTGACGCTCGAGGCCTTGGAGCAGGCTGCAGCCGTGGGGGAAGGGCAGTTGCGACGCTGGTTGCTGCCGGTGGCGGCGGCGCTGGTCGACATCCCAGCGCTCGACCTTGATCCCGCCCAGGCCGAGGCCATTGCGCGCGGGCAGCGGTTCGCGCTGGCGAAACCGCACCCGCTTGGCCGCTGCGCGGCGTTCGCCGGGGGCCGCTTGCTGGCCCTGGTGGAGGTTGACCAGGCGGGGCAAACGCGGGTTTTGCGGGGTTTCAACCTGCCAAACGGCGACATCGTGGGCATTGAGCCAGCCAATGCCCTTGTTGAAGTACCTGATGGATCAGTAGAATAG
PROTEIN sequence
Length: 337
MVARTKVHARSRTPRGAWRDVHGIVLLDKPVGLSSNRALQAVRRLFGARKGGHTGTLDPMASGLLPLCFGEATKLAGGLLGSRKAYVAECQLGVTTDTDDAAGEIVGRRPVPALEAAALEVLLDRFRGRIMQAPPMYSALHQAGERLYAKARRGEKIAVPAREVEIHRLVVLGRTPDTLTLEVECGTGTYIRSLARDLGEALGCGAHVSALRRTWVAPFREPRMVTLEALEQAAAVGEGQLRRWLLPVAAALVDIPALDLDPAQAEAIARGQRFALAKPHPLGRCAAFAGGRLLALVEVDQAGQTRVLRGFNLPNGDIVGIEPANALVEVPDGSVE*