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scnpilot_solids1_trim150_scaffold_106_curated_66

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(79924..80787)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 276.0
  • Bit_score: 398
  • Evalue 6.50e-108
diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 276.0
  • Bit_score: 396
  • Evalue 9.40e-108
Diaminopimelate epimerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUH3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 276.0
  • Bit_score: 399
  • Evalue 3.50e-108

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 864
ATGCTGAGCACGCAAGCGGTCTTGCGCTTCAGCAAGATGCATGGCCTGGGCAACGACTTCGTCATGCTCGACTGCCGCGAGCACCCCATGCCGCTGGACACGCTGCAACTGCAGGCGTTGAGCAACCGGCGCACCGGGGTCGGCTTCGACCAGTTGCTCAGCATCGAGCCCGCGCGCGATACGGCCTGCGCGTTTGCCTATGGCATCTGGAACGCCGATGGCTCGGCGGTTGGACAGTGTGGCAATGGCGTGCGCTGCGTGGCCGCCTGGCTGCACCGCGCCGGCTTACTGGCGCTGGACACCACGGTGCAACTGCAGAGTCCGTCCGGTCCGGTGTCGGTGCGCCTGCAGAGCGCGACGGAAGTGACCGTCGACATGGGCGAGCCGATCTTCGATCTGCCGCGCATCCCGTTCCTCGCCGATGCGGTAGCGCCGCTGTATGCCGTGGATGTCGGCGGCGAAAACGTCGAGATCAGCGCACTGTCCATGGGCAATACCCAAGGCGTGCTCGTCGTGGACGACCTGGACGATCCGCGCGTGGCGCGGCTCGGGCCCTTGCTGACCATGCACCCGCGGTTCCCGGAACAGGCCAACATCGCCGTGGTGCAGAAGCTCGACCGCAACCATGTACGCATGCACGAGCATGAGCGCGGTGCTGGTTGGACCCAGGCTTGCGGCAGCGGCGCCTGCGCGACGGTGGTGGCCTTGCGCCAACGCGGGGAAGTCGACGCGAATGTGCAGGTACAGATGCCGGGAGGTGCCTTGCACATCTCCTGGGCGGGCGTCGGCGAACCGGTGTGGATGACTGGCCCGGCGGCCTTCGTGTTCGAGGGGGAGTGGCCGATTCCGGATCGTGCGCACTGA
PROTEIN sequence
Length: 288
MLSTQAVLRFSKMHGLGNDFVMLDCREHPMPLDTLQLQALSNRRTGVGFDQLLSIEPARDTACAFAYGIWNADGSAVGQCGNGVRCVAAWLHRAGLLALDTTVQLQSPSGPVSVRLQSATEVTVDMGEPIFDLPRIPFLADAVAPLYAVDVGGENVEISALSMGNTQGVLVVDDLDDPRVARLGPLLTMHPRFPEQANIAVVQKLDRNHVRMHEHERGAGWTQACGSGACATVVALRQRGEVDANVQVQMPGGALHISWAGVGEPVWMTGPAAFVFEGEWPIPDRAH*