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scnpilot_solids1_trim150_scaffold_1334_curated_1

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(3..1406)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 472.0
  • Bit_score: 607
  • Evalue 1.90e-170
Transcription termination factor Rho n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ39_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 472.0
  • Bit_score: 607
  • Evalue 1.40e-170
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 471.0
  • Bit_score: 591
  • Evalue 2.50e-166

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1404
GTGTCTGATACTGACAACCATACCCCCGACTCCGAGGGCGACAGCCCGAGCGCTGCCAAAAGCAAACCGCCGCGCCCCCGTGCCCCGCGCCGCAGTGCGGCAGCGAAGACAGCGCCCAAGACACAGGAGCCGGCTGCTGCAGCCGACCGCGCGCAAGCCGCCGCAGCGGCGCCCGCTCCGGCAGCGCCCGTAACCACGCCCCCGGTAGCGGCAGCTTCGGCAGGCCACGCGCAGGCCCCGGTGCGGACCGAACCCGCGCGGCCCGTCGGCGGTGGCGGGCAATCCGAATCTGCCGAACCAAGGTACCCGAGCGCGAACGCCGAGCCATCCTGGAACCCCGACCAGGGTGTCGATGCGGCGTCCGGCGCGAACCCGCAACCGCATGCCAACGCCACGCCGCGCGGCACCACCGACGCCGCGACCAACCCGGAGTCGGAACGGGCCGCGACGCAAGTCGACGGGCCCAACCCGAACAACGGCCGGCAAGGCGCCAACAACCAGCGCGACGGCCGCGGGCGGCGCCGGCGCAACGAACGCGGCGGCAACGGGCAGCAGCAGCGCCAGCACGGCAACAACCCGCGCCACAACAATCCCAGCGGCCTGCCGGTCGACGACGACAACGCCGATCCGGGCAGCAACGACCGCGTCATCAACCTGACCGAGCTCAAGCGCAAGAACGCGGTGCAGTTGCTGGAATTCGCCGAATCCGTCGGCGTCTCCGAAGGCGTTTCCCGCGCGCGCCGGCAGGATGTGATCTTCAATGTGCTGAAGGCGCACGCCCGCTCCGGCGGCGGCATCTGGGCCGAGGGCGCGCTGGAAATCCTGCAGGACGGCTTCGGCTTCCTGCGCTCGGCCGACGAGTCCTACTTGGCCGGCCCCGACGACATCTACGTCTCGCCCAGCCAGATCCGGCGCTTCAACCTGCGCACCGGCGACTACATCACCGGCCGCGTGCGGCACCCGAAGGAAGGCGAGCGCTACTTCGCCATGCTGCGCCTGGAGACGATCAACGGCGATCCGCCGGAGACGTCGAAGAACAAGATGCTGTTCGAGAACCTGACGCCGCTGTTCCCGCGCAAGATGTTCCACCTCGAGCGTGGCAACGGCTCCAGCGAGGACATCACCGGCCGCATCCTCGACCTGATCGCGCCGATCGGCAAGGGCCAGCGCGGCCTGATCGTGTCGCAGCCGAAATCCGGCAAGACCATGATGCTGCAGAACATAGCGCAGGCGATCACGCACAACGATCCCGACACGCACCTGATGATCCTGCTGATCGACGAGCGCCCGGAGGAGGTCACCGAGATCTCGCGCTCGGTGCGCGCCGAGGTGATCAGCTCCACCTTCGACGAGCCGCCGGTGCGCCACGTGCAGGTGGCGGAAATGGTGATCGAACGGGCCAAG
PROTEIN sequence
Length: 468
VSDTDNHTPDSEGDSPSAAKSKPPRPRAPRRSAAAKTAPKTQEPAAAADRAQAAAAAPAPAAPVTTPPVAAASAGHAQAPVRTEPARPVGGGGQSESAEPRYPSANAEPSWNPDQGVDAASGANPQPHANATPRGTTDAATNPESERAATQVDGPNPNNGRQGANNQRDGRGRRRRNERGGNGQQQRQHGNNPRHNNPSGLPVDDDNADPGSNDRVINLTELKRKNAVQLLEFAESVGVSEGVSRARRQDVIFNVLKAHARSGGGIWAEGALEILQDGFGFLRSADESYLAGPDDIYVSPSQIRRFNLRTGDYITGRVRHPKEGERYFAMLRLETINGDPPETSKNKMLFENLTPLFPRKMFHLERGNGSSEDITGRILDLIAPIGKGQRGLIVSQPKSGKTMMLQNIAQAITHNDPDTHLMILLIDERPEEVTEISRSVRAEVISSTFDEPPVRHVQVAEMVIERAK