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scnpilot_solids1_trim150_scaffold_274_curated_14

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 12894..13616

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridylate synthase, 16S rRNA uridine-516 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W482_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 240.0
  • Bit_score: 482
  • Evalue 3.50e-133
Pseudouridylate synthase, 16S rRNA uridine-516 {ECO:0000313|EMBL:EIL94273.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 240.0
  • Bit_score: 482
  • Evalue 4.90e-133
pseudouridylate synthase, 16S rRNA uridine-516 similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 240.0
  • Bit_score: 409
  • Evalue 6.90e-112

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGACCGAATCCCTCCGCCTGGCCAAGCGCGTCGTCGCGCTGGCGCAATGTTCGCGCCGCGAGGCCGAGCAGTACATCGAGGGCGGCTGGGTGCGGGTCGACGGCATCGTGGTGGAAGAGCCGCAGTTCATGGTCGACACGCAGACCGTCGAGATCGACCCGGCCGCCAAACTGGCGCCGCTGGAGGCAGTCACCCTGGTGCTGCACAAGCCGGCCGGCTACGACGCGGGCGACGGGCCGAACCCGGCCCGCGCGCTGGTCACGCCGGCCACGCGATGGACCGACGACGCTTCCGGCGTGCGGCCGCTGCAGCGGCACATGCACGGCCTCGGCGCGCCGCTGGCCTTGCCCACCGCGGCCAGCGGCCTGCTGGTGTTCACCCAGGACTGGCGGGTCAGCCGCAAGCTCACCGAGGACATCGACCGGATCGAGCAGGAGTTCGTGGTCGAGGTCAGCGGCACGCTGAAGGAAAACGGCCTGGCCCTGCTCAACCACGGCCTCAGCTTCAACAACTACGCGATGCCGCCGATCAAGGTCAGCTGGCAGAGCGAGCACCGCCTGCGCTTCGCCTTCAAGCGGATGTCGGCGAGCCGGATCGAGCCGATGTGCCACGCGGTCGGCCTCGAGGTGCTGGCGATGAAGTGCCTGCGGGTGGGGCGCATACCGCTGTCGAAACTGCCGCCGGGGCAATGGCGCTACCTGGCACCCGACGATCGCATCTGA
PROTEIN sequence
Length: 241
MTESLRLAKRVVALAQCSRREAEQYIEGGWVRVDGIVVEEPQFMVDTQTVEIDPAAKLAPLEAVTLVLHKPAGYDAGDGPNPARALVTPATRWTDDASGVRPLQRHMHGLGAPLALPTAASGLLVFTQDWRVSRKLTEDIDRIEQEFVVEVSGTLKENGLALLNHGLSFNNYAMPPIKVSWQSEHRLRFAFKRMSASRIEPMCHAVGLEVLAMKCLRVGRIPLSKLPPGQWRYLAPDDRI*