ggKbase home page

scnpilot_solids1_trim150_scaffold_301_curated_10

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 12206..13537

Top 3 Functional Annotations

Value Algorithm Source
Lipid A core--O-antigen ligase-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3B2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 443.0
  • Bit_score: 873
  • Evalue 7.50e-251
Lipid A core--O-antigen ligase-like protein {ECO:0000313|EMBL:EIL93953.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 443.0
  • Bit_score: 873
  • Evalue 1.10e-250
lipid A core-O-antigen ligase-like enyme similarity KEGG
DB: KEGG
  • Identity: 86.9
  • Coverage: 443.0
  • Bit_score: 809
  • Evalue 7.20e-232

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1332
ATGAATTCGTTCGGCACCTCACTCAAGGGCGCGTTGCGCTCGCCACTGCTGCCGTTCTGGCTGGTGGTCGCGCTGTTGCCGTTCGGGCGCAGTTCCGAGCTGGGCACCGCGTTGTGCCTGCTCGGCGTGATCATGCTGTTCGCCCGCGATCCGCAGGCCCTGCAGCAGCATGCCGGGGCACGCCTGCTGCTCTGGCTGCTGGCCGCCTATGTCGGGGCGGCGCTGTGCTCCGCGCTCGATGCGGTCCGGCCGGGCAAGAGCTGGAGCACGGTGGCCGCCCTGTTGCGCTACGCGCCACTGGGTTTGTACGCGTGTTTTGCGATCCGCCGCGAAAGCAAGCTGCAGGCCCTGTATGTGGCGGTGGCCTGGGTATTGGCGCTGTGGTGTCTGGACGCCTGGGTGCAGGCGCTGACCGGCTGGAGTATCGGCGGCCAGGCGGAGGCCGAGCGCGTCTCCGGCATCTTCGGAGCGGACAACCTCAAATTGGGACCGACCCTGGCCGTGCTGTCGCCATTTGCGCTGTGGACTGCGCGACGACGCTGGGGCCTGCCGGGCCTGCTGCTCGCCTTTGCCCTGATCCTGGGCCCGATCCTGCTGGCCGGTGCGCGCGCCGCGTGGCTGTGCTACGTGCTGGTGGCGCTGGGTTTTGCCTGGCGCGAGACGAAGTCGCCGCTGCGTTTTGCCGGCTTCTGCGTGGTGGCGGCCCTGCTGCTGGCGCTGGCCGGGGGACTGGCCTGGAAGACTTCGACGCGCTTCCATGACCGCATCGATCGCACCCTGCTGGCCCTGCACGGCACCGACCAGTCGCTGGACGCCGCACTCAGCGGCCGCCTCGACATCTGGCACGCCAGCGTCGGGATGTTCGCCGCGCATCCGCTCAACGGCGTGGGTGTGCGTGGCTATCGCTATGCGTATCCGCAGTACGCCCCGGCGAATGATCATTTCGTGGTATCGACCGAAGCCTGCGGCGTCGGCGAGGGTGCCTGTCATGCCCACCAGCTGGTGCTCGAGATACTCACCGAGACCGGTGCGATCGGCCTGCTGCTGTGGCTGGCCGGCGTGGTGCTGGCATGGCGGGCGTGGCGCAGCGTGGGTGCGGCAGCACGGGAGCGTGCGTTCCCGGTGAGCCTGGCACTGGGCGTGATGCTGTTTCCGCTGAACACCCATCTGGCCTTCTACTCGGCCTGGTGGGGGCTGCTGTTCGCCTGGCTGCTCGGTCTGTGGTGTGCCAGTTTATTCGTTGCCGGCATCCCTGCCGGCAACGAAGAGCCCGGCGTCCCTGCCGGACTTCTCAAAAGAGCTGCCTCCGTGGAGGCCCGCGATGGGGCGTGA
PROTEIN sequence
Length: 444
MNSFGTSLKGALRSPLLPFWLVVALLPFGRSSELGTALCLLGVIMLFARDPQALQQHAGARLLLWLLAAYVGAALCSALDAVRPGKSWSTVAALLRYAPLGLYACFAIRRESKLQALYVAVAWVLALWCLDAWVQALTGWSIGGQAEAERVSGIFGADNLKLGPTLAVLSPFALWTARRRWGLPGLLLAFALILGPILLAGARAAWLCYVLVALGFAWRETKSPLRFAGFCVVAALLLALAGGLAWKTSTRFHDRIDRTLLALHGTDQSLDAALSGRLDIWHASVGMFAAHPLNGVGVRGYRYAYPQYAPANDHFVVSTEACGVGEGACHAHQLVLEILTETGAIGLLLWLAGVVLAWRAWRSVGAAARERAFPVSLALGVMLFPLNTHLAFYSAWWGLLFAWLLGLWCASLFVAGIPAGNEEPGVPAGLLKRAASVEARDGA*