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scnpilot_solids1_trim150_scaffold_803_curated_15

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(15976..16275)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit alpha n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5D6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 99.0
  • Bit_score: 197
  • Evalue 5.40e-48
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 99.0
  • Bit_score: 197
  • Evalue 7.60e-48
integration host factor, alpha subunit similarity KEGG
DB: KEGG
  • Identity: 99.0
  • Coverage: 99.0
  • Bit_score: 195
  • Evalue 6.50e-48

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGGCGCTGACCAAGGCGGAAATGGCCGAGCGGCTATTCCTCGATGTGGGCCTCAACAAGCGTGAGGCGAAGGAATTCGTGGACGCCTATTTCGAGGTGGTTCGCGGAGCGCTGGAAAACGGCGAGCAGGTGAAGTTGTCCGGTTTCGGCAATTTCGACCTGCGCCTGAAGAACCAGCGACCAGGGCGCAATCCCAAGACCGGCGAGGAGATTCCGATCTCCGCCCGCCGCGTGGTGACGTTCCGACCGGGACAGAAACTCAAGGTAAGAGTCGAGGGCTATGCTGGATCAAGGGAATAA
PROTEIN sequence
Length: 100
MALTKAEMAERLFLDVGLNKREAKEFVDAYFEVVRGALENGEQVKLSGFGNFDLRLKNQRPGRNPKTGEEIPISARRVVTFRPGQKLKVRVEGYAGSRE*