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scnpilot_solids1_trim150_scaffold_416_curated_31

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(31818..32378)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX21_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 186.0
  • Bit_score: 347
  • Evalue 6.10e-93
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:EIL91762.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 186.0
  • Bit_score: 347
  • Evalue 8.50e-93
putative RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 44.0
  • Coverage: 182.0
  • Bit_score: 144
  • Evalue 2.40e-32

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGCAGGCGACATCACAGCAGCCCGAGGTCACTGTGTTGCTCACCCGTGCCCGCGCGGGAGACAGCGCGGCGCTGGGCCAGGCCTATTCGGCGGTCTACGATGAACTCAAGCGCGCTGCGCGGTCGCAACTTCGGTGCATGCGCGACGACTTCCAGACCACCGCGCTGGTGCACGAGGCCTACCTCAAGCTGGGTGGCGCGCAGATGGCGGCGGCGAACCGCAACCATCTGCTGGCGCTTTCCGCACGGGCGATGCGGCAGGTGCTGGTGGACAACGCGCGCGCCCGCAAGGCGGACAAGCGCGGCGGCGGACAGGACGCGCTGACCCTGAGCGCCGCGCTGGGCAAGGGCGAACAGGCCGCGGTCGAGGTGCTGGCGCTGGACGAACTGCTGTCGTCCCTGTCCCAGCTCGACGAACGCGCCGCGCAGATCGTCGAATTGCGTTACTTCGGCGGCTATTCCGAGGTCGAGGTTGCCGCGATGCTGGACATCAGCGATCGCACCCTGCGTCGTGACTGGCGCCGGGCGCGCGCCTTCCTGCTGGCGGAAATGCAGGCGTGA
PROTEIN sequence
Length: 187
MQATSQQPEVTVLLTRARAGDSAALGQAYSAVYDELKRAARSQLRCMRDDFQTTALVHEAYLKLGGAQMAAANRNHLLALSARAMRQVLVDNARARKADKRGGGQDALTLSAALGKGEQAAVEVLALDELLSSLSQLDERAAQIVELRYFGGYSEVEVAAMLDISDRTLRRDWRRARAFLLAEMQA*