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scnpilot_solids1_trim150_scaffold_252_curated_9

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 9389..10255

Top 3 Functional Annotations

Value Algorithm Source
AlgR/AgrA/LytR family regulatory protein RpfD n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W239_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 288.0
  • Bit_score: 599
  • Evalue 1.40e-168
AlgR/AgrA/LytR family regulatory protein RpfD {ECO:0000313|EMBL:EIL93530.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 288.0
  • Bit_score: 599
  • Evalue 1.90e-168
response regulator of the LytR/AlgR family similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 289.0
  • Bit_score: 492
  • Evalue 7.40e-137

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 867
ATGGGCACGACTCCCGGCTTCGACATCTACCAGCGCTGGCGGCGACCGTTCGAGGTCGCGGTCTGGCTGGTGTTCTTCGCGATCAACGGCGTCTTCAACAGCATCAACTCGGGCATCGACCACGCCGGCGCGGCGGCGTGGGAACCCTGGCTGTGGGAGTGGAGCAGCGTGGTGATGCTGCTGGCGCTGTTGCCGGGGGTGATCGCGCTGGAGCGGCGCTGGCCGATCCGCTTCGACACCTGGCGCCGCAACCTGCCGTTGCATCTGCTGTTCAGCGTTCCGTTCAGCCTGATCCACGTGGGCGGGATGCACGTGTTGCGGAAACTGGGCTACACCCTCGCCGGGGCGCATTACGACGCGTTCGGCGCCTCATGGTGGATGAATGCGGGCTACGAATACCTCAAGGATGTGCGCACCTATTTCGTGATCGTCGGCGCGCTGGTGCTGTACCGGCTGTGGCTGCTGCGCCAGCAGGGCGAGGCGCGACTGCTGGCCGCGCCGGACGAAGGCGCGCCGGTGGAGCCGGTCGAGCGCCCCGAACGATTCCTGGTGCGCAAGCTGGGCAAGGAATTCCTGCTCAACGCCAACGAGATCGAATGGCTGCAGGCTTCGGGCAACTACGTGAACCTGCGCGTACGCGGTCGCGACTACCCGCTGCGGGCCACCATGGCGGGGATCGAGGAGCGGCTGGACCCGGCCCGCTTCGTGCGGGTGCATCGCGGCTACTTCGCCAACCTCGACTATCTTGTCGAGATCGAGCCGCTGGAAACCGGCGACGCGCGCCTGCAGATGCGTGACGGCACCAGGCTTCCCTGCAGCCGGCGTTACCGCGCCGCACTGCGCGAGCGTTTCGGGCAGCCCGACTGA
PROTEIN sequence
Length: 289
MGTTPGFDIYQRWRRPFEVAVWLVFFAINGVFNSINSGIDHAGAAAWEPWLWEWSSVVMLLALLPGVIALERRWPIRFDTWRRNLPLHLLFSVPFSLIHVGGMHVLRKLGYTLAGAHYDAFGASWWMNAGYEYLKDVRTYFVIVGALVLYRLWLLRQQGEARLLAAPDEGAPVEPVERPERFLVRKLGKEFLLNANEIEWLQASGNYVNLRVRGRDYPLRATMAGIEERLDPARFVRVHRGYFANLDYLVEIEPLETGDARLQMRDGTRLPCSRRYRAALRERFGQPD*