ggKbase home page

scnpilot_solids1_trim150_scaffold_1022_curated_5

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(5813..6820)

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU29_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 335.0
  • Bit_score: 661
  • Evalue 3.40e-187
LacI family transcriptional regulator {ECO:0000313|EMBL:EIL90720.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 335.0
  • Bit_score: 661
  • Evalue 4.80e-187
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 333.0
  • Bit_score: 361
  • Evalue 2.30e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1008
ATGACGCGCGTGACCATCACCGACGTCGCCCGCGCCGTCGGCACCTCGAAGAAGACCATCTCGCGGGTGCTCAACAACGACCCGAACGTCAGCCAGTCCATGCGCCAGAGCGTGCTGGCTGCGATCGCGCAGCTCAACTACCGGCCGCTCACCTCGGCGCGCAGCCTGGCCACCAACCGCTCCTTCATGATCGGCCTGCTGTACGACAACCGTTCGCCCAGCTACATCATGGAAGTGCAGGCCGGCGTGCTGGAGGCATGCGAGGCGCAGCACTACAGCATGATGGTGCAGCCGCTGGTGTCCACCGCGGCGGACTTCGTCGAGCGCGTCGAGGACATCCTGTCGCGGCAACGGCCCGACGGGCTGATCCTGACCCCGCCGCTCACCGATCACCCGCAGTTGCTCGATTGCCTGCAGCGCAACGGCGTGCCGTTCGCCTCGATCGCGCCGCGCCACCCCGAAGGTTGCATCGGCGTGATGCTGCGCGAGCGCGAAGCCGCCGCGGCGATGGTGGACCACCTGGTGGCGCTGGGCCACCGACGCATCGCGCACATTCTCGGCGATCCCGAACACGGCGCCGGCATCTGGCGCCTGGCCGGCTACCGCGACGGCCTGGCGCGCGCCGGGCTGCAGGAAGACCCCGCCTACATGGTGCAGGGCCGGTTCTCCTTCGAGTCCGGCGTGGCGGCCATGCGCCAGCTGCTGGCCTTGCCGCGGCGGCCGACCGCCGTCTTCGCCGCCGACGACGACATGGCCGTCGGTGCGATCTGGGCGGCGGCGGAAGCGGGGGTATCGATCCCGCGCGACATCTCCATCTGCGGCTTCGACGACACCACCATCGCGACCCAGGTGTGGCCACCGCTCACCACCGTCCATCAACCCGTGCGCGAGATGGGTCGTCGCGCGACCGAGGAACTGCTGCGGCGCGTGCTGAACAAGGGCGAGGCCACGATGGTCGAGGTCGATTACCAGATGCGCCTTCGCGCCTCGACGGCGCCCACCGCATAG
PROTEIN sequence
Length: 336
MTRVTITDVARAVGTSKKTISRVLNNDPNVSQSMRQSVLAAIAQLNYRPLTSARSLATNRSFMIGLLYDNRSPSYIMEVQAGVLEACEAQHYSMMVQPLVSTAADFVERVEDILSRQRPDGLILTPPLTDHPQLLDCLQRNGVPFASIAPRHPEGCIGVMLREREAAAAMVDHLVALGHRRIAHILGDPEHGAGIWRLAGYRDGLARAGLQEDPAYMVQGRFSFESGVAAMRQLLALPRRPTAVFAADDDMAVGAIWAAAEAGVSIPRDISICGFDDTTIATQVWPPLTTVHQPVREMGRRATEELLRRVLNKGEATMVEVDYQMRLRASTAPTA*