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scnpilot_solids1_trim150_scaffold_290_curated_5

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 2790..2999

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4F9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 95.7
  • Coverage: 69.0
  • Bit_score: 135
  • Evalue 1.80e-29
LysR family transcriptional regulator {ECO:0000313|EMBL:EIL94350.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 69.0
  • Bit_score: 135
  • Evalue 2.50e-29
bacterial regulatory helix-turn-helix, lysR family protein similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 57.0
  • Bit_score: 61
  • Evalue 1.00e-07

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
GTGCGCACGGCCGCCGATCTTCCGTCCACGCTGATGCGCCTGGGCCCGCAGCAAGGCCTGCCGCCGCTGCCGGGCGTGGAGCTGTGCCTGCACACCGCTCCCGGCGCGCCGTCGGCAGCGCTGACCCGGTTGCGGCAAGCCGTGATGGAGCAGGCGCAGCTGCACCTGGGCCGGATGGCGAGGAAGGGAAGCGGCCCAGGCGACCGCTGA
PROTEIN sequence
Length: 70
VRTAADLPSTLMRLGPQQGLPPLPGVELCLHTAPGAPSAALTRLRQAVMEQAQLHLGRMARKGSGPGDR*