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scnpilot_solids1_trim150_scaffold_295_curated_10

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(7604..8464)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 286.0
  • Bit_score: 570
  • Evalue 1.20e-159
diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 281.0
  • Bit_score: 462
  • Evalue 1.10e-127
Diaminopimelate epimerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUD2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 286.0
  • Bit_score: 570
  • Evalue 8.80e-160

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 861
ATGCGGCTGCACTTCTCCAAGATGCACGGCATCGGCAACGACTTCGTCGTGCTGGATTGCCGGCAGCATCCGTTTCCGCTGAACCCGGAACAGATCAGTGCGCTGGGCGATCGCCATGTCGGCGTCGGTTTCGACCAGTTGCTGAGCGTCGAGCCCGCGCGCGATCCGTCCTGCGCGTTCTACTACGGCATCTGGAACGCCGATGGTTCGCCGTCGGGCCAGTGCGGCAACGGCGTGCGTTGCGTGGCGGCGTGGCTGCATCGCGCCGGCGCGCTGGCGCTCGGCAAGCAGGTAATGATCGAAAGTCCTTCGGGGCCGGTGACGGTACGCCTGCTGGACGCCCACGAGGTGACCGTGGACATGGGCGAGCCACGCTTCGAACCCGGGCGCATTCCGCTGGTGGCCGAGGCGGGGACGGACCGCCACGAAATCCTCGTCGGTGAGCGCAAGGTCGAGTTCGGCGCCGTCTCGATGGGCAATCCCCACGCGGTGGTGAGCGTGGCTGATCTGGCCGACCCGGCGCTGGAGCAGCTCGGCCCGCTGCTGACCAGCCATCCGCGCTTTGCCGAAGGCGCCAACGCCGGCTTCGTCCTGCAGCTGGACCGCACGCAGCTGCGCCTGCGCGTGCACGAACGCGGCGCCGGCTGGACGCGCGCCTGCGGCACCGGTGCCTGTGCCGCGATGGCGGTGCTGCACCAGCGCGGCGAGGTGGGCGACTCGGTGAGCGTCGAACTGCCCGGCGGCAAGTTGCGGATCGATTGGGCCGGCCCCGGCCATCCGCTGTGGATGACCGGTCCGGCTGCCTTCGTGTTCGAGGGCGAATGGCCGGTTCCGGCGGTCGACGGCGACCGGGGCGGTTGA
PROTEIN sequence
Length: 287
MRLHFSKMHGIGNDFVVLDCRQHPFPLNPEQISALGDRHVGVGFDQLLSVEPARDPSCAFYYGIWNADGSPSGQCGNGVRCVAAWLHRAGALALGKQVMIESPSGPVTVRLLDAHEVTVDMGEPRFEPGRIPLVAEAGTDRHEILVGERKVEFGAVSMGNPHAVVSVADLADPALEQLGPLLTSHPRFAEGANAGFVLQLDRTQLRLRVHERGAGWTRACGTGACAAMAVLHQRGEVGDSVSVELPGGKLRIDWAGPGHPLWMTGPAAFVFEGEWPVPAVDGDRGG*